| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2032 |
|---|
| Symbol | |
|---|
| ID | 3566750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2183664 |
|---|
| End bp | 2184419 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637680503 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_285247 |
|---|
| Protein GI | 71907660 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 0.240988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAC TAGGCGTCAA CATTGATCAC ATCGCGACCA TCCGTCAGGC CCGTCGGACC
TACGAACCAG ATCCGGTCTG GGGAGCGGTT GAAGCTCATC TGGGGGGGGC TGACGGAATC
ACGGTTCATT TACGCGAGGA CCGGCGCCAC ATTCAGGATT CCGATGTACG GCGCCTGCGT
GAAACCACGC AGATTAAACT TAATCTTGAA ATGGCGGCGA CCGACGAGAT GGTCGGCATC
GCTTGTGGCC TGAAGCCGGA AATGGCCATG TTGGTACCGG AAGGTCGCCA TGAGGTGACG
ACTGAAGGCG GTCTCGACAT CCTTGCCCAG GAGGCTCGGT TGAAGGGGGT GATTTCCCGT
CTTGCTGACG CCGGTATTGT CACCAGCGTC TTCATTGATG CCGATCCGGA GCAGATTGAA
GCTGCAGCAC GAATTGGTGC CAGTGTCTGC GAAATTCACA CCGGTCCGTA TGCGCATGCC
TTTTACGATA AAGGCCGAGA TGCTGAGGCG CCAGCCGTGC TGGCTGAGAT CGCCAAGATT
CGCAAAGCCG GACAGACCAT TCGCCACCTT GGCATGCGCT TCAATGCCGG CCACGCCCTG
AACTACTACA ATGTGCAACC GCTTGCCAGG CTGGCCGGCA TTCGCGAATT GCATATTGGT
CACGCAATTG TCAGTCGCGC CGTCTTCGTT GGGCTACGCG AAGCGGTGCG CGAAATGAAG
GTTCTGATGC GCGAAGCAGC GGAACGCGGC GAATGA
|
|---|
| Protein sequence | MIELGVNIDH IATIRQARRT YEPDPVWGAV EAHLGGADGI TVHLREDRRH IQDSDVRRLR
ETTQIKLNLE MAATDEMVGI ACGLKPEMAM LVPEGRHEVT TEGGLDILAQ EARLKGVISR
LADAGIVTSV FIDADPEQIE AAARIGASVC EIHTGPYAHA FYDKGRDAEA PAVLAEIAKI
RKAGQTIRHL GMRFNAGHAL NYYNVQPLAR LAGIRELHIG HAIVSRAVFV GLREAVREMK
VLMREAAERG E
|
|---|
| |