Gene Daro_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1882 
Symbol 
ID3569597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2023264 
End bp2023803 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content61% 
IMG OID637680353 
ProductLipocalin-related protein and Bos/Can/Equ allergen 
Protein accessionYP_285098 
Protein GI71907511 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG CTCGTACGCC CCTCCTTGCC GGACTGCTGG CATTCGCTCT CCTCGCCCCG 
ACTGCCCGGG CCGAGATGCC CGCCGTGCAA AGCGTCGGCC AGATAGACCT CGCGCGCTAT
ATCGGCAAAT GGTATGAAAT CGGCGCCTTC CCGATGTTCT TCCAGCGGCA GTGCATCGGC
GACACCACGG CCGAATATTC GCTCAAGGCA GACGGCGAGA TCGCCGTCGA CAACCGTTGC
CGGACCGAGA GCGGCTTCGA TCAGGCCATC GGCCGCGCCT GGGTGCCCGA GACAGCAAAA
AACGCGGAAT TGAAGGTGTC GTTTTTCTGG CCGTTCCGTT CCGACTACTG GGTCATCGCC
CTGGATGATA GCTACCGCTG GGCTGTCGTC GGCAATCCGA ACCGCAAGTA CCTGTGGCTG
CTCTCGCGGA CGCCACGGCT GCCTCAAGCC GAAATCGAGC GCGCCTTGAA CTCGGCCAAA
GCCCAGGGCT ACGACCTGAA CCAATTCAAA TACACCCGCC ACACGGAGAC AAAGCAATGA
 
Protein sequence
MNIARTPLLA GLLAFALLAP TARAEMPAVQ SVGQIDLARY IGKWYEIGAF PMFFQRQCIG 
DTTAEYSLKA DGEIAVDNRC RTESGFDQAI GRAWVPETAK NAELKVSFFW PFRSDYWVIA
LDDSYRWAVV GNPNRKYLWL LSRTPRLPQA EIERALNSAK AQGYDLNQFK YTRHTETKQ