| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1835 |
|---|
| Symbol | |
|---|
| ID | 3566089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1974636 |
|---|
| End bp | 1975202 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637680306 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_285051 |
|---|
| Protein GI | 71907464 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4314] Predicted lipoprotein involved in nitrous oxide reduction |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 0.74509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.107815 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATCGAC GTAAGCTGGT ATTGCTGCTG CCGACCTTGA TCGTCAGCAA ACTTGTATTT
GGTGCCGATG GGGTATCCGT GCCCTTGGGG GATTCGGCGC CGCTGACGGA TGAGCTGGAA
AAATATCCGC GCTGCGTCAT CTGCAACATG GATCGCCGCA AGTTCCATTA CGCACGGCAC
CTGCTGCATT ACGGCGACGG GCAGGCCCAG GGGACGTGCT CGGTGCATTG TGCGGCGGAA
TGCATGCTGC GGGAACGGCG GCGTGGTTTC CTGACGATCT ACGCCCCGGA TTTCGGCGCG
GCGAGCGATC CGAAGCCGCT CATTGAGGCC GCCGCTGCGA CCTATCTGAT CGGCAGCGAT
CTGCGTGGCG TGATGACGCC TGTCAGCAAG GTGTCGTTTG CCAGTCGGGA AGCCGCTTTG
CTGGCGAAGC AAAGCTACGG CGGCGAATTA GCCAGTTTTG CCGTGGCCAT CAGCGCTTCC
TTTGAAGAAA TGGCGGGCAG CGTTGTGCGC CGTTATGGCA ACGACCGGGA GCGCCTGTTG
CGCAAGGCGC AGCAGGCAGC CTCCTGA
|
|---|
| Protein sequence | MNRRKLVLLL PTLIVSKLVF GADGVSVPLG DSAPLTDELE KYPRCVICNM DRRKFHYARH
LLHYGDGQAQ GTCSVHCAAE CMLRERRRGF LTIYAPDFGA ASDPKPLIEA AAATYLIGSD
LRGVMTPVSK VSFASREAAL LAKQSYGGEL ASFAVAISAS FEEMAGSVVR RYGNDRERLL
RKAQQAAS
|
|---|
| |