Gene Daro_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1564 
Symbol 
ID3568649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1676857 
End bp1677711 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content59% 
IMG OID637680032 
ProductABC transporter related 
Protein accessionYP_284783 
Protein GI71907196 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.0239809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.409995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGT TCAATAACGT TGCCAAGACC TTCCGCAAAG CCCGCGTGCT CGACGGCATC 
AGCCTCGACA TCGCCATTGG CGAGCGGGTC GCACTGATCG GCTCCAACGG CGCCGGAAAG
ACCACGCTGA TCCGCTGCTT GCTCGGCGAG TACACTCATG ACGGCAGCGT CGCCATCAAC
GGCCTCGATC CGCGCAGCAA CCGTACAGCG GTACTCGGCA CTATCGGTTT CGTGCCGCAG
CTGCCCCCAC CATTGAAGAT GCCGGTCGGC CAGTTGATTG ATTTCTCGGC CTCATTGTGT
GGCACAGATC CACAACGGAT TCATGGCATA GCCAAGCGCC TTGGCCTCGA TGTCGAAAGC
ATCCTAGCTC GCCAATTCGT CCGCCTCTCC GGCGGCATGA AACAGAAGCT GTTGATCGCC
ATCGCCCTCG GCCGTGACGC CAAGGTGCTG GTCATGGACG AGCCCGCCGC CAATCTCGAC
CCGGAAGCTC GCAAGATTTT CTTCGACCTG CTGGCTGAAC GTCTGGACGA TGCGACCATG
ATCATCTCCA GCCACCGCCT CGACGAAGTG TCGGCATTGG TCAATCGCGT CATTGAAATG
GACATGGGTA AAGTCGTCCT CGATGACAAG GTTGCGGATG CCGTGACGCT GACCGCCAAG
CTGGCCTGCC GCATCGCGCT CAGCCGGTTT GAACCGGCCT TTGCCAAGGC TCTGGACGGC
TGGAATATCG CAAGCCGCGA CGAAGGCAAG CTGATATGGG AAGGTGAAAT TGCCGGGCCA
GACCGCCTGC GTTTTCTCGG CATCATTTCC CGTTACACCG CTTTGGTCAG CGACCTTTCG
CTTTCCGAGA ACTGA
 
Protein sequence
MIQFNNVAKT FRKARVLDGI SLDIAIGERV ALIGSNGAGK TTLIRCLLGE YTHDGSVAIN 
GLDPRSNRTA VLGTIGFVPQ LPPPLKMPVG QLIDFSASLC GTDPQRIHGI AKRLGLDVES
ILARQFVRLS GGMKQKLLIA IALGRDAKVL VMDEPAANLD PEARKIFFDL LAERLDDATM
IISSHRLDEV SALVNRVIEM DMGKVVLDDK VADAVTLTAK LACRIALSRF EPAFAKALDG
WNIASRDEGK LIWEGEIAGP DRLRFLGIIS RYTALVSDLS LSEN