Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1561 |
Symbol | |
ID | 3568646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1675047 |
End bp | 1675541 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637680029 |
Product | thioredoxin |
Protein accession | YP_284780 |
Protein GI | 71907193 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.00616006 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.258468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAAAC TGTCTGCGAG TTTGATTTTT TGCCTGTTTT CCGGCTTGGC TGCAGCTGAC GAGTTACCCT CATCTGCCCC GCTATTCGCT GCCACGCTCA ATGATGTCGA CGACAAGCCA GTCGCGCTTG AGCGCTACAA GGGGAAACCA CTGGTCGTCA ATTTCTGGGC GCGCTGGTGC GGCCCCTGCC GCGTCGAAAT TCCTGAACTG ATCAAGTTTC GAGCCGCCCA CAAAGGCAAG GTCGAAGTGC TCGGTATAGG CATCGAGGAT AATGCCGAAC CCGCCAAGGA GTTTGCCAAG GCTTACGATA TGGACTACCC AGTTTTTGTT GCCAAGGACA AGGGTATCCC TCTGATGCAG GCCCTCGGCA ACACCAAGGC CGGCCTACCC TACACCTTGT TTATCGACCG CAACGGTCAA GTTGTGCAAA GGAAGATGGG CATCGTCAAA AAAGCTGATT TCGACGCTGT GCAGGACATG CTGCTGAAGA AATAG
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Protein sequence | MSKLSASLIF CLFSGLAAAD ELPSSAPLFA ATLNDVDDKP VALERYKGKP LVVNFWARWC GPCRVEIPEL IKFRAAHKGK VEVLGIGIED NAEPAKEFAK AYDMDYPVFV AKDKGIPLMQ ALGNTKAGLP YTLFIDRNGQ VVQRKMGIVK KADFDAVQDM LLKK
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