Gene Daro_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1561 
Symbol 
ID3568646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1675047 
End bp1675541 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content54% 
IMG OID637680029 
Productthioredoxin 
Protein accessionYP_284780 
Protein GI71907193 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.00616006 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.258468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAAAC TGTCTGCGAG TTTGATTTTT TGCCTGTTTT CCGGCTTGGC TGCAGCTGAC 
GAGTTACCCT CATCTGCCCC GCTATTCGCT GCCACGCTCA ATGATGTCGA CGACAAGCCA
GTCGCGCTTG AGCGCTACAA GGGGAAACCA CTGGTCGTCA ATTTCTGGGC GCGCTGGTGC
GGCCCCTGCC GCGTCGAAAT TCCTGAACTG ATCAAGTTTC GAGCCGCCCA CAAAGGCAAG
GTCGAAGTGC TCGGTATAGG CATCGAGGAT AATGCCGAAC CCGCCAAGGA GTTTGCCAAG
GCTTACGATA TGGACTACCC AGTTTTTGTT GCCAAGGACA AGGGTATCCC TCTGATGCAG
GCCCTCGGCA ACACCAAGGC CGGCCTACCC TACACCTTGT TTATCGACCG CAACGGTCAA
GTTGTGCAAA GGAAGATGGG CATCGTCAAA AAAGCTGATT TCGACGCTGT GCAGGACATG
CTGCTGAAGA AATAG
 
Protein sequence
MSKLSASLIF CLFSGLAAAD ELPSSAPLFA ATLNDVDDKP VALERYKGKP LVVNFWARWC 
GPCRVEIPEL IKFRAAHKGK VEVLGIGIED NAEPAKEFAK AYDMDYPVFV AKDKGIPLMQ
ALGNTKAGLP YTLFIDRNGQ VVQRKMGIVK KADFDAVQDM LLKK