Gene Daro_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1525 
Symbol 
ID3568630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1633311 
End bp1634252 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content61% 
IMG OID637679993 
ProductLysR family transcriptional regulator 
Protein accessionYP_284744 
Protein GI71907157 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGAC TTCATTCAAT GGGCGTTTTC GTCGCTGTGG CCGAAGAAGA AAGCTTCGCC 
GCGGCGGCGC GTCGCCTGAA CATGTCACCG CCCGCCGTTA CGCGAACCAT TGCCGCGCTG
GAAGAGCACC TCGGCATCAA GTTGCTGACG CGGACGACAC GCTTCGTCCG GGCCACCGAT
GCCGGCCAGC GTTACCTGGA AAGCTCCCGG CGTATCCTGG CGGAGGCGGA CGAGGCCGAC
GAGGCGGCCG CCGGGGTGCA TGCGGCGCCA CGCGGGCAAC TCACGGTTAC AGCACCGGTC
CTGTTTGGCG GCATGCATGT CATGCCAGGC ATTGTGGAGT TCCTGACACG CTACCCGGAA
GTTTCTGTCA ACGCAGTATT TCTCGACCGC GTCGTCAATT TACTGGAAGA AGGTATAGAT
GTCGGCATTC GCATTGGCGA ATTGCCTGAC TCGACCATGC GCGCCATTCC AGTCGGCTCA
GTCAGGCGCG TTATTTGCGC TTCACCTGAC TACCTCACCC GGCATGTGGA GCTAAAAGAA
CCGCGAGACC TGGCTGGACA ATCGATCATT GCGGCCAGCC CCATATCGCC GAGTTCGGAG
TGGCGCTTGG GCAATGGCAA GCAGCCAATC AGCGTCAAGG TCCAGCCACG CCTGACCGTC
ACCAACAACG CAGCGGCCAT CGAGGCAGCG TTGATGGGTT TTGGTATTAC GCGCCTGATG
TCCTACCAAG TTGCCGCCCA TCTGGCGTCC GGACAACTCA TCCGGCTATT CCCCGAATAC
GAGCCGCCAG CGCTGCCGAT CCACATCATC CATCTCGAAG GAAGGCTGGC TTCTGCGAAG
GTCCGTGCGC TGGTCGATGT GCTGGTTGAA CGGCTGCGCG GGAATGCCGC ATTAACCCCG
TCAAGCATCG AAGCCATCGT AGGGAAAGCA AAGTCTGACT GA
 
Protein sequence
MDRLHSMGVF VAVAEEESFA AAARRLNMSP PAVTRTIAAL EEHLGIKLLT RTTRFVRATD 
AGQRYLESSR RILAEADEAD EAAAGVHAAP RGQLTVTAPV LFGGMHVMPG IVEFLTRYPE
VSVNAVFLDR VVNLLEEGID VGIRIGELPD STMRAIPVGS VRRVICASPD YLTRHVELKE
PRDLAGQSII AASPISPSSE WRLGNGKQPI SVKVQPRLTV TNNAAAIEAA LMGFGITRLM
SYQVAAHLAS GQLIRLFPEY EPPALPIHII HLEGRLASAK VRALVDVLVE RLRGNAALTP
SSIEAIVGKA KSD