| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1488 |
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| Symbol | |
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| ID | 3568998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1605113 |
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| End bp | 1606708 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637679956 |
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| Product | PAS |
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| Protein accession | YP_284707 |
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| Protein GI | 71907120 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02938] nitrogen fixation negative regulator NifL |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.877677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACC GCGGCATGGA TTCTGCTTTG GTCGTAGAAA ACGAATTCAT GAGGAGCCAC
CCAATGACGG CAGTCCAGCG CGCAAAACAA ATAATCGAGC CATCGGCCGC CCAGGCACTT
CCGCCGGAAG CCTACCGGCA GGCCGTTGAC CAGGCCGACC TGGCCATCTC GATTACTGAC
GACAAGGCCA ACATCCTTTT CGCCAACGAT GCGTTCACGC GGGTGACCGG CTATACGAAG
GAAGAGATCA TCGGCAAGAA CGAATCGGTG CTCTCCAACC ACACGACGCC GCCAGAGGTG
TACCAAGCCC TGTGGAAGTC GCTCGCCGAA CAAAAGCCAT GGGCTGGCAA ACTGCTCAAC
CGGCGCAAGG ATGGCGAGCT TTACCTGGCG GAACTGAGCA TTTCCCCGGT CGTCGATGCG
ACGGGAACAA CCACCCATTT CCTCGGCATG CACCGCAACA TCACCGAGCT GCATCGCCTG
GAACGCGTTG TCGCCAACCA GAAGCACCTG ATCGAATCGG TCGTCGATGC TGCGCCAGTC
GCTTTTGCCC TGCTCGACCC AACCGGCCGC GTCATCCTCG ACAACCAGGA ATACAAGAAG
CTGGTCACCG ACCTGCGGGT CAAGGAACCG GCCCATACCG TACTCGACAG CCTGCTGCCG
GCCTGGCGCG AAGCACTGGC CGAAAACCCG CAGCAACTGG TAGTCAGCAA CCGCGAAGCC
CGGATCGACC GGGCCGCCGG CCGGGCGCGC TGGCTGTCGG TCACCTCGTC AGTGATCGGC
ATGCACAGCG ATTGCGCCGA CAGCTATTTC TGCGCCGCCG GTCAGCCTGG CTTGCTGCTG
GTTATCGCCG ATGTCAGCAA CCTGCGCGAG GAACAGGAGC GCGCCCGCGC CTCGGCCCTG
CAGGCCGTGC TGGCCGAGGA GGAACGCACG GCGGCCATCC GCGAAGGCCT GTCGGCCGCC
ATCTTCCGGC TGGAAGAGCC GATGAACGTG ATGTCTTCGG CCATTTCGGT GCTCCAGCGC
CGCGACCCGG CCAGCGCCGC CATGCTGCAG CAGGCGCTAT CGGGCAGCCG CGAACACATG
GAGGCACTGC GCCAGGTCAT TCCGCAAAGC CCGCAGGAGA TCGTCGTCAG CGTAAACATG
AATGAAATCC TGCGTGACGT GCTCGAAGTC AGCACGCCCC GCCTGCTCGC CGCCGGCATC
ATCGTCGATT GGCAACCGGC CGCCACCCTG CCTGCCATCC TCGGCCGCCC ATTGCAACTG
CGCATGCTGT TCAAGGCGCT GGTCGACAAC GCCATCGAGG CGATGAACAT CAAGGGCTGG
AAGCGCCGCG AACTGTCGCT GACCAGCGCC CTGAACGGTG ACTGTATCGT CGTTTCCGTG
CTCGACAGCG GCCCCGGCAT CCCACAGGAC TGGCGCTACA AGGCCTTCGA ACCCTTCTTC
ACGGCCAAGG GCGGCAGCGG CAAACACATT GGTACCGGAC TGTCGCGCGC CCAGCAGGTG
GTGGCCGATC ACGGCGGCAT CATCGATCTC GATGACAGCC CGAGCGGCGG TTGCGCGGCG
ATTGTCGAAT TCCGGGTCGA CGGTGACCCG ATCTAA
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| Protein sequence | MLHRGMDSAL VVENEFMRSH PMTAVQRAKQ IIEPSAAQAL PPEAYRQAVD QADLAISITD
DKANILFAND AFTRVTGYTK EEIIGKNESV LSNHTTPPEV YQALWKSLAE QKPWAGKLLN
RRKDGELYLA ELSISPVVDA TGTTTHFLGM HRNITELHRL ERVVANQKHL IESVVDAAPV
AFALLDPTGR VILDNQEYKK LVTDLRVKEP AHTVLDSLLP AWREALAENP QQLVVSNREA
RIDRAAGRAR WLSVTSSVIG MHSDCADSYF CAAGQPGLLL VIADVSNLRE EQERARASAL
QAVLAEEERT AAIREGLSAA IFRLEEPMNV MSSAISVLQR RDPASAAMLQ QALSGSREHM
EALRQVIPQS PQEIVVSVNM NEILRDVLEV STPRLLAAGI IVDWQPAATL PAILGRPLQL
RMLFKALVDN AIEAMNIKGW KRRELSLTSA LNGDCIVVSV LDSGPGIPQD WRYKAFEPFF
TAKGGSGKHI GTGLSRAQQV VADHGGIIDL DDSPSGGCAA IVEFRVDGDP I
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