| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1440 |
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| Symbol | |
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| ID | 3569047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1565107 |
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| End bp | 1566303 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637679908 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_284659 |
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| Protein GI | 71907072 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 0.615682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGGG TATGCGCTGC GCCAACGGCA TCGCCAATTA TCATTGCCCA TACTGCGCCA
ACAACCGGGC GATTTTCCTT GCATGCCGAA TCCGATCGGC GTGGTGCCGA GATGGCAATC
GACGAATTCA ATGCGCGGGG CGGTGTCCTG GGCCGGGAAA TCGTACTTGT TTCACGCGAC
CCCGGTCTCG ATCCAAAACG TGCAGCCTCG GTTGCCGAGG AGCTCATTAC ACAGACCAAG
GTTGGATTCA TCGTGGGAGC GCTTGCTTCT GGCGTTGCTG CGAGCATGTC TGCGGTCTGC
CAGAAATACG GTGTGATCTA CATCAACACC AATTCATCGG CGCCCTCTGA ATCGGTCGAG
AACGCCCATC GCACAAAGTT CGCCTTTGAC GCTCATGGCG CGAACTTCAA CCGGGCGCTC
CTGAAGTATG CGCTGGCCAA TCGCAAATCA AAGCGGGTCC TGCTGTTGAC TGAGGATAAT
GAATTCGGTC GCAGCAATGC GCTAGCCATG CGCCCCTATA TCGCTGAGTA TGGGGGGACG
GTAGTTGGTG AAGTTGTCAC GCTGGAGACG CTACCTGATC CTGTCGAGAT CCTGAGAAAA
GTGGCCGCTA CGCCGGCTGA TGTCGTCGCC GTCAGTATCA GTGGTGACAA CCAGATCAAG
CTGTTTTCAC AGATTGATCC GAAGGTACTC GAAAAGCAAT TCTGGATCGT TGGCGAGGTG
GACTGGGAAG AGCTTTATCC CGCCCCAGGA ACGCCACGAC CGCTATTCGG TACCACTTGG
GCCTGGAATC TGAAAACCCC GGGAACCGCA GACTTCGTCG CGCGTTACCG GAAACGCTAT
GGCCATACCA AGCTCAACTA TCCGGGAGAT GTCACTCATG CAGCCTATCT CGCTACAAAG
GCGTTGCTCG TCGCTATCGA GCAGGCCGGC AGTACGGATA GCCATGCGGT CATCCAGCAA
CTCGAAAGCT ACAAGGCAAC TGCCAAGGAG CGTATGCAGG ATGCCGCAGC ATTCATGGAC
CCGAACAGTC ACCATGTCCA GCAAAGCATT TACATCGCTC GCTGGAATCC CATTGCTGCT
CGGCCTGAAC AAGGTATCGA GATAGTTGGG CATATCCCTC CTGAGCAAGT CCGCTATGAA
CCCGAACGGA CAACCCATCT GGAATTGCTG GCAGATACAC CACATTACGC AAAATAA
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| Protein sequence | MPGVCAAPTA SPIIIAHTAP TTGRFSLHAE SDRRGAEMAI DEFNARGGVL GREIVLVSRD
PGLDPKRAAS VAEELITQTK VGFIVGALAS GVAASMSAVC QKYGVIYINT NSSAPSESVE
NAHRTKFAFD AHGANFNRAL LKYALANRKS KRVLLLTEDN EFGRSNALAM RPYIAEYGGT
VVGEVVTLET LPDPVEILRK VAATPADVVA VSISGDNQIK LFSQIDPKVL EKQFWIVGEV
DWEELYPAPG TPRPLFGTTW AWNLKTPGTA DFVARYRKRY GHTKLNYPGD VTHAAYLATK
ALLVAIEQAG STDSHAVIQQ LESYKATAKE RMQDAAAFMD PNSHHVQQSI YIARWNPIAA
RPEQGIEIVG HIPPEQVRYE PERTTHLELL ADTPHYAK
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