| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1359 |
|---|
| Symbol | |
|---|
| ID | 3569249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1478558 |
|---|
| End bp | 1479607 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637679827 |
|---|
| Product | oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region |
|---|
| Protein accession | YP_284578 |
|---|
| Protein GI | 71906991 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0000150243 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000955183 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCG CTCCTGCGGA GGGAAACATG TCAAATATAA AAAATGTCAC GCTACAGTTT
AGCGACGGCA TATGTAAATC GGTTGCTGTC AAGGATGGCG AGAGCGTTTT GGATGCAGCA
CTGGCGGCTG ACCTTCAGTT GATACATCAG TGTCGATCCG GAAGTTGTTC GTGTTGCATG
GCGACGCTGA CTGAGGGCAA TGCGAAGATG CGTTCTGGAT CTAGTTCGAC GCTATTGCGC
AGTGAGTTCG AAGCAGGGCA GCGTTTGCTG TGTCTTGCCG AGCCGGAGAG CGATTGTACC
TTTGCGCTGA ACTACGATAG CAACGCCAGC TTGCAGCAAG CGACCAAAGT TCGGGCCTTC
ATTGACGATG TCGAGAAGCT GGCGCATAAC GTCGTGCGCT TGACGCTGGA GTTGGCTGAA
GGCGAGTGGC TCGATTTCAG GCCCGGTCAG TTCGTTCAAG TCAAGGTGCC GGGGCTGAGT
GTGATGCGCA GCTACTCGCC TGCCAGCACA TCGGCCGATT TGCCCAAGAT TGTTCTGCTA
ATCCGGTTGT TGCCGGACGG CGCCATGTCG AACTATTTGC GGAGCGAAGC AGCCCGTGAT
GCAGTTCTAG AACTGGAGGG CCCATTCGGC AGTTTCTTCC TGCGTGAAAA GGTCAAGGCA
CCTCACATCA TGATTGCAGG TGGCACAGGG CTTGCTCCAG TGATGTCGAT GATCGACTCC
ATTCAGAAGA CGTCCGGAAA GAAGCCCCCA ATTCTCTTAA GCTTCGGGTG TGCTACACCG
GATTCGCTGT TCTGTCTCGA CGATATCGAG TTGAGAAAGC ATTGGCTACC CAGTCTAACC
AATCGGATTT CTGTCGACCG CGAGGCTGCG GGCAGCCTGC TGCAAGGAAA TCCGGTCGAT
GCCTTGCGTG ACGATGACGT CAAGGACCCC GATACGGTCG CCTATATCTG CGGACCGCAG
CCAATGATAG AGGCTGCATA TCGCCGCCTT GAGGCGCTGG GCGTACGTCA CGAAAATATT
TTTGCCGAGC AATTTACTCC TTCGAACTGA
|
|---|
| Protein sequence | MSRAPAEGNM SNIKNVTLQF SDGICKSVAV KDGESVLDAA LAADLQLIHQ CRSGSCSCCM
ATLTEGNAKM RSGSSSTLLR SEFEAGQRLL CLAEPESDCT FALNYDSNAS LQQATKVRAF
IDDVEKLAHN VVRLTLELAE GEWLDFRPGQ FVQVKVPGLS VMRSYSPAST SADLPKIVLL
IRLLPDGAMS NYLRSEAARD AVLELEGPFG SFFLREKVKA PHIMIAGGTG LAPVMSMIDS
IQKTSGKKPP ILLSFGCATP DSLFCLDDIE LRKHWLPSLT NRISVDREAA GSLLQGNPVD
ALRDDDVKDP DTVAYICGPQ PMIEAAYRRL EALGVRHENI FAEQFTPSN
|
|---|
| |