Gene Daro_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1353 
SymbolmhpB 
ID3569243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1472428 
End bp1473381 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content50% 
IMG OID637679821 
Product3-(2,3-dihydroxyphenyl)propionate dioxygenase 
Protein accessionYP_284572 
Protein GI71906985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.000498865 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000137148 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCAGCAT TGCTTCAATG TATTTCGCAT AGCCCGATGA AAGGTTATGT GGATCCTTCA 
CCGGCTATTG TCTCCGATGT GGAAGTGGCA ATCGCTCGTA TGCGAAAGGA ACTCGTGGAT
TTCGATCCGG AAGTTATCTT TCTTTTTGCT CCTGATCACT ACAACGGTTT TTTTCTTGAT
GTCATGCCCC AGTTTTGCGT TGGGATCGCT GCGACATCAG TTGGAGACTA TCGGACTACG
CCAGGGCCGA TCAATGTTCC ACGTGAGATT GCAAGGTCCT GTGCCGAGCA TTTGATCAGT
AACGACATTG ATGTTGCGAT CTCTTACCGA ATGCAGGTGG ACCATGGAAT GGTTCAGCCG
TTGGAGGAAT TGATGGGAGG CCTAAATGCC TATCCCGTAG TCCCTTTATT CGTTAACGGT
GTTGCTCCGC CGCTTATCAG TATTCGTAGA GCTAGGCTGT TTGGGGCAGC GGTTGGAGAG
TATGCAAAAA AACTCAATAA ACGCTGTTTG TTTATCGGGT CTGGTGGACT TTCCCATAAC
CCCCCTGTGC CCCAGATTGA TACAGCTACA GAGGAGTTTG CTGAATTCCT TATAGCTGGG
CGCAATCCAT CACCAGAAAG ACGAGCTGCT CGTCAGCAGC GAACCAAGGA CGCTGCGATT
CGTTTTGCTG CAGGAGACAG TCAGCTGCAT CCGATCAATT CGGTATGGGA CGAGGCTTTT
ATGGCCGATC TTGTGAATCA GGATTGGGGT GCCCTAGATG CTTACCGTAA CAGTGAAATT
ACAGAACAGG CTGGTATTTC AACTCACGAG GCGAAATCCT GGGTCGCGGC GCATGCAGCC
ATGAACGCAG CAACTTCCGG CGGCTACATG GCAGAGGTCC GTTACTACAA GGCTATTCCT
GAGTGGATTG TTGGGTATGG GGCTATGGCA GGAAGTGCTG AGCAAGCAAC ATAA
 
Protein sequence
MAALLQCISH SPMKGYVDPS PAIVSDVEVA IARMRKELVD FDPEVIFLFA PDHYNGFFLD 
VMPQFCVGIA ATSVGDYRTT PGPINVPREI ARSCAEHLIS NDIDVAISYR MQVDHGMVQP
LEELMGGLNA YPVVPLFVNG VAPPLISIRR ARLFGAAVGE YAKKLNKRCL FIGSGGLSHN
PPVPQIDTAT EEFAEFLIAG RNPSPERRAA RQQRTKDAAI RFAAGDSQLH PINSVWDEAF
MADLVNQDWG ALDAYRNSEI TEQAGISTHE AKSWVAAHAA MNAATSGGYM AEVRYYKAIP
EWIVGYGAMA GSAEQAT