Gene Daro_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1258 
Symbol 
ID3569365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1366037 
End bp1366513 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID637679724 
ProductdTDP-4-dehydrorhamnose epimerase 
Protein accessionYP_284483 
Protein GI71906896 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG TGAGTACCGG ACCAATCCAG GGCGTCACGC TCACGCCCCT GCGTGAAATT 
CGCGACGACC GGGGTGCGCT ACTGCACATG TTGCGTTGTG ACGCGCCAGA CTTCACCCGC
TTCGGCGAAT GCTATTTTTC AGAAGTGTCG GCTGGAGCGA TCAAAGGCTG GAAGCGCCAT
CGTCTGCAAA CGCAGAACTT TGCCGTGCCC AGCGGCCGCA TCCGTCTGGT GGTATTCGAC
GAACGTCCCG ACTCGAAAAG CAGAGGCGCT ACCCAAGTGC TTGAACTCGG CCGGCCGGAC
CAATACGTGC GGGTGACGAT TGCGCCCGGG CTTTGGTACG CCTTCGCCGC CTTGGGAAAT
ATGCCGGCCC TGCTGGCCAA TTGCGCCGAT CTTCCCCACG ACCCGAATGA AAGCGAGACC
CTGCCCCTGG ATACCCCGCT CATTCCCTTT CGATGGAGTG AGGGCAGGCT GGCATGA
 
Protein sequence
MADVSTGPIQ GVTLTPLREI RDDRGALLHM LRCDAPDFTR FGECYFSEVS AGAIKGWKRH 
RLQTQNFAVP SGRIRLVVFD ERPDSKSRGA TQVLELGRPD QYVRVTIAPG LWYAFAALGN
MPALLANCAD LPHDPNESET LPLDTPLIPF RWSEGRLA