| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1178 |
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| Symbol | |
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| ID | 3569304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1282987 |
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| End bp | 1286088 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637679645 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_284404 |
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| Protein GI | 71906817 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.659175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCCCA GTTTCTCGAC TTTTGTCATC CGGCAGCGGA TGTTTATTCT GGTGATGGCG
GTCGCACTGG CCATCGCCGG GTTCCGCGCC TTGCAGGATC TGCCGGTTGA GGCCTTTCCC
GATGTCCAGG ATGTACAGGT CCAGGTGGTG ACGCAATATC CAGGTCAGTC GCCGGAGGAG
GTCGAGCGCA CGATCAGTAT CCCGGTGGAA CGCGAAATGA GCGGCGTGCC GCGTGCCACG
CAGGTGCGTT CGGTTTCGAT TACTGGGCTG TCGGTGGTCA CCCTGACCTT TTCGGAGGGC
ACTAATGACT ATTTCGCCCG CAACCAGGTC CTGGAAAAAC TGCAGAACGT CTCCTTTCCC
CCTGGCATCC AGCCGCAGCT GGCGCCGTTG GCGACGGCCG TTGGTGAGAT CTATCGCTAT
GTCCTGAGCA CACCGGCCGA CATGCCGCCG CGCGAGGTTC GAGCCTTGCA GGACTGGGTG
GTTCGTCCCG CCTTGCGGCG CGTGGCGGGG GTGGCCGACA TCAACAGTTT TGGCGGTGCC
GTCAAGGAAT ACCAGGTGCG GGTGAATCCG GCCGCCCTGA TGCGCTATGG CGTGACACTC
GACCAGATTT CCCAGGCCTT GGCCAATGGC AATCAGAATG CCTCCGGCGG CCTGATGAAG
CGTGGCGAGG AATCGCTGGT CGTCCGTGCC GTCGGTCTTT TCGCCAATCT CGACGACATT
CGCGCCGCCG TGGTGCTGGC CAAGGATGGC AAGACCGTGA CGGTCGGCGA CTTGGCCGAG
GTGTCGGTGG GTGATCGTCC CTTGTCCGGT ATCGTCGCCA ACGACGACCA GGATTCGGTG
GTTGAGGGCA TCATCCTGAT GACCAAGGGG GGCGATCCAT CCAAGGTCGT CGCCGATGTA
CTGCTGAGGG TCGATGAACT GAATCATGGT CAGCTGCCAA AGGGCGTCTC GATCAAGCCG
ATCTACCAGC GTACGGAACT GGTCAAGCAC ACCGTGCATA CCGTCAGTGA AAATCTGTTG
GTCGGTGCCC TGCTGGTGGT GTCCGTGCTG CTCATCTTCC TGCGCGAATG GCGGGCGGCT
CTGGTCGTCG CAGCCATCAT TCCGCTGACC CTCCTTTTCG CCTTCATGCT GATGGATCTG
AAGGGCGTGC CGGCCAACCT GATTTCGTTG GGCACGGTGG ACTTCGGCAT CATCATCGAC
AGCGCGGTGG TGCTGGTCGA GGCGCTGATG GTCCGTCTTG CCGTGCACCA TCCGACGGCG
GCCATCGAAT CGGCCGTCGG GCGGCGCTTC GATGCCCTGC GCTGGGTGAC CGCCAGCCTG
ACCAAGCCGA TCCTGTTCTC GAAGGCCATC ATCATTTTGG CCTTTCTGCC GATCTTCACC
TTCCAGCGTG TTGAAGGGCG AATTTTTGCG CCGGTGGCGC TGATCCTGTC CTTTTCGCTG
GTCGGTGCCG TGCTGTTCAC GCTGACGGTC GTTCCCGCGC TGTTGTCGCT GGTGCTGGCC
AAGGCCGATC TGGCGGAAAA GCACATCGAC TGGCTGGCCA AGCTGCAGCG TGCCTATCGC
CGTCTGCTCA TGCGCTGCCA GCGCACGCCG CGCAAGGCAT TCGGTATTGC CGGGGTGATC
GCCTTTCTGG CTTTCTCCCT GATTCCCGTG CTGGGCAGCG AATTCCTGCC GCGTCTGGAC
GAGGGCAATC TGTGGCTGAC CATCACGCTG CCGCCGGGGT CTTCGCTGGA GCAGAGCAAG
GATGTTGAAC GTGCCGTCCG GAAGACGCTG CGTACTTACC CGGAAGTGAA GATGCTGGTG
ACCCAGGTCG GCCGCCCCGA TGACGGTACC GATCCGAAGG GACCGAATAA CATTGAGATT
CTGGCTGACC TGCAGCCGCG CGGCGATTGG CGCTTCGCCG ACAAGGAAGC GCTGGTCGAG
GACATGTCGA ACAAGCTGAA GTCGATTCCC GGTCTGCCGA CCAATTTCTC GCAGGTGATC
CAGGACAACG TCGAAGAGGC GCTGTCCGGC GTCAAGGGCG AGATCGCCAT CAAGGTCTTT
GGGCCGGACC TCGACATCCT GCAGGACAAA GCGGAGCAGA TTGCCGGCAT CCTGCGCACC
ATCCACGGCA GTCGTGATGT CGCCGCCATC CTGCCCAGCG GCCAGCCGGA AGTGGCGGTA
CTGCCCAACC GGGTAAAAAT GGCCCGTCTC GGACTGTCGA TGGCCGATCT CGACAATGCG
GTGCAGACGG CGCTGGGCGG CAGTGCCGTC GGCGGTTTCT ACGAAGGCGA ACGGCGTTTC
GATCTGGTGC TGCGTTTTGC CGCGCCTTAC CGTAATTCGG TTGAAGACGT TGGCGCCGTC
CCGGTTGCCC TGCCCAACAA TGGCGGGACG GTGCGGATAT CCGATGTTGC GACGGTCGAG
GTTCGCGAAG GCGCTTCGCG CATTTCCCGT GAGTCTGGCG GCCGCAACGT CTCGGTCAAG
GCCAACCTGC AAGGCCGCGA CCAAGGCAGT TTTGTCGATG AGGCCATGGC CAAGGTGGCC
AGCGATGTTC AATTACCGCC GGGCTACCGC GTCGTCTGGG GCGGGCAGTT CGAAAACCAG
CAGCGCGCCA TGAAACGGCT GGCGGTCATT GTTCCGGCCT CGTTGTTCGG CATCTTCGCA
CTGCTCTTCT GGGCCTTCCG CTCGATTCGC CTGGCCGCGC TGATTCTCGC CATGCTGCCG
TTCAACATTG CCGGCGGATT CTTCGCGCTG GGCCTGGCTG GTCTGCACCT GTCGATTTCG
GCGGCGGTCG GCTTCATTGC CGTGGCCGGC ATCTCGGTAC AAAACGGGGT GATCATGGTC
GAAGAGATTG TCCGCATGGT CGATAACGGC GCTTCGCTGG TCCGGGCCGT GACTGAGGGG
GCGGTTTCCC GCCTGCGGCC GATATTGATG ACGGCGCTGA TGGCCGGCCT TGGCTTGCTC
CCGGCTGCCC TGTCCAGCGC CATCGGCGCC GAAACGCAAC GCCCATTCGC CGTGGTGATC
GTCGGTGGTG TCGTCACGGC CACCCTGTTC ACCCTGACCC TACTGCCCCC TCTGGCCTTC
TGGGGCATGC GCCGGCGCAA ACAGGAAAAC GATAGCGAAT GA
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| Protein sequence | MLPSFSTFVI RQRMFILVMA VALAIAGFRA LQDLPVEAFP DVQDVQVQVV TQYPGQSPEE
VERTISIPVE REMSGVPRAT QVRSVSITGL SVVTLTFSEG TNDYFARNQV LEKLQNVSFP
PGIQPQLAPL ATAVGEIYRY VLSTPADMPP REVRALQDWV VRPALRRVAG VADINSFGGA
VKEYQVRVNP AALMRYGVTL DQISQALANG NQNASGGLMK RGEESLVVRA VGLFANLDDI
RAAVVLAKDG KTVTVGDLAE VSVGDRPLSG IVANDDQDSV VEGIILMTKG GDPSKVVADV
LLRVDELNHG QLPKGVSIKP IYQRTELVKH TVHTVSENLL VGALLVVSVL LIFLREWRAA
LVVAAIIPLT LLFAFMLMDL KGVPANLISL GTVDFGIIID SAVVLVEALM VRLAVHHPTA
AIESAVGRRF DALRWVTASL TKPILFSKAI IILAFLPIFT FQRVEGRIFA PVALILSFSL
VGAVLFTLTV VPALLSLVLA KADLAEKHID WLAKLQRAYR RLLMRCQRTP RKAFGIAGVI
AFLAFSLIPV LGSEFLPRLD EGNLWLTITL PPGSSLEQSK DVERAVRKTL RTYPEVKMLV
TQVGRPDDGT DPKGPNNIEI LADLQPRGDW RFADKEALVE DMSNKLKSIP GLPTNFSQVI
QDNVEEALSG VKGEIAIKVF GPDLDILQDK AEQIAGILRT IHGSRDVAAI LPSGQPEVAV
LPNRVKMARL GLSMADLDNA VQTALGGSAV GGFYEGERRF DLVLRFAAPY RNSVEDVGAV
PVALPNNGGT VRISDVATVE VREGASRISR ESGGRNVSVK ANLQGRDQGS FVDEAMAKVA
SDVQLPPGYR VVWGGQFENQ QRAMKRLAVI VPASLFGIFA LLFWAFRSIR LAALILAMLP
FNIAGGFFAL GLAGLHLSIS AAVGFIAVAG ISVQNGVIMV EEIVRMVDNG ASLVRAVTEG
AVSRLRPILM TALMAGLGLL PAALSSAIGA ETQRPFAVVI VGGVVTATLF TLTLLPPLAF
WGMRRRKQEN DSE
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