Gene Daro_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1002 
Symbol 
ID3569327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1095417 
End bp1096265 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content62% 
IMG OID637679461 
Producthypothetical protein 
Protein accessionYP_284228 
Protein GI71906641 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATG ATCGCCGCCT GTGGCTGAAG GCGCTCGCCG CCTTGCCCGT TTTCTCTGCA 
CTGCCGGCCA TGGCTGACGG TCTTGAAACC ATTCGCCAGC GCGGCCGCTT GCGTGTCGCC
GTCTACAACG ACTTTCCGCC CTATGCCATG GCAGGCGGCA AAGGCATCGA TGCCGACATC
GCCCGGGCCA TTGCCGGCAA GCTTGGCCTG ATGGCCGAAA TCGTTGGCTA CAACGCCGAC
GAGGACATGA ACGACGACCT GCGCAATATG GTCTGGAAAG GCCATTACCT CGGCACCCAG
CCCTCCGATG TGATGATGCA TGTGCCGGTC GACGAGCATC TGGCTCGTGC CAACGACAAG
GTCCGCATCT TCGGCATCTA CCACCGTGAA ACGCTGGCCC TGGCGCGTAA TCCGCAGCGC
GTGCCGCAAG CCTTGGCTGG TTCGGCGGCG GTGGCGCTGG AAATCTTCAC CCGGGAAAAA
ATCGGTGTCG AAACGACTTC GCTGGCTGAT TCATTCCTGC TTGGCGTCTT GAATGGTCGT
CTACGTGAGA ACGTCGTCCA TTTCAAGAGT GTCGCCGAGG CCGCCAAGGG CATGGCCGAA
GGCAAGGTGG CCGCCGTTCT GGCGCCGCGC GCCGAGCTGG AGGCCGCGCT CAAGGGGCAG
GACAAGGCTG TCATCGACAG CCCGCGCTTT GCCGAGCTGA AAGTCGATAA CTGGCCGCTC
GGCATGGCCG TCAAGGTCGA GGAGCAGGCC TTGGCCGAAG CCATCGGTTC GGCTTTGGCT
GACTTGAAGA AGGATGGAAC CATCGCCGAC ATCTTCAAGC GCCACGGCAT TTCCCACCAG
CCAGCCTGA
 
Protein sequence
MKNDRRLWLK ALAALPVFSA LPAMADGLET IRQRGRLRVA VYNDFPPYAM AGGKGIDADI 
ARAIAGKLGL MAEIVGYNAD EDMNDDLRNM VWKGHYLGTQ PSDVMMHVPV DEHLARANDK
VRIFGIYHRE TLALARNPQR VPQALAGSAA VALEIFTREK IGVETTSLAD SFLLGVLNGR
LRENVVHFKS VAEAAKGMAE GKVAAVLAPR AELEAALKGQ DKAVIDSPRF AELKVDNWPL
GMAVKVEEQA LAEAIGSALA DLKKDGTIAD IFKRHGISHQ PA