Gene Daro_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0956 
Symbol 
ID3570271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1036369 
End bp1037418 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content56% 
IMG OID637679415 
Productrespiratory-chain NADH dehydrogenase, subunit 1 
Protein accessionYP_284182 
Protein GI71906595 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.0350312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.369744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC TGATGAATTT CGGTACCGGG ATTTTTGGCG GTGCCTGGCC TGCCGTCTGG 
ACACTTATCA AGATTGTCCT GATCGTCGCC CCGATGATGC TCGGCGTTGC TTATCTGACC
TACTTCGAGC GCAAGGTCAT CGGCTATATG CAAGTGCGTA TCGGCCCTAA CCGGGTCGGT
CCATGGGGTC TGATCCAGCC GATCGCCGAC GGCCTGAAGC TGCTGATGAA GGAAATCATC
GTCCCCAGCG GCGCCAACAA GGGCATCTTC ATCATTGCCC CGATGCTGGC TATTGCACCG
GCACTGGCGG CTTGGGCGGT GGTGCCTTTC ACCGACTCGC TGGTTCTGGC CAACATTGAT
GCCAGCCTGC TCTACATTAT GGCCATCACC TCGATGGGGG TGTACGGGAT CATCCTGTCC
GGCTGGGCTT CCAACTCCAA GTACGCCTTC CTCGGCGCCA TGCGTTCTGC TGCCCAGATG
GTTTCATACG AAATCTCCAT GGGCTTCTCG CTGATCTGCG TTCTGATGGT GTCCAACAGC
CTGAATCTGG TCGAGATCGT CAATGTTCAA AATCAGGGCC GCTTTGCCGG CTGGGGGCTG
AGCTTCCTGT CCTGGAACTG GCTGCCGCTG TTCCCGATGT TCTTGGTCTA TCTGATTTCC
GGCGTTGCTG AAACCAATCG TGCTCCGTTC GACGTCGCCG AAGGTGAATC CGAGATCGTT
GCCGGTTTCC ATGTTGAATA TTCCGGGATG GCCTTTGCGG TCTTCTTCCT GGCTGAATAC
GCCAACATGA TTCTGGTCTC AGCTCTGACT TCCATCATGT TCCTTGGTGG CTGGCTGTCT
CCGGTTAGCT TCCTGCCTGA TGGCATTCTC TGGCTGTTCG CCAAGATGTC GGCAATTCTC
TTCTTGTTCC TGTGGTTCCG GGCGACGTTC CCGCGCTACC GCTACGACCA GTTGATGCGT
CTGGGCTGGA AAGTGTTCGT GCCGATCTGT CTGATCTGGC TGGTTGTTGT CGGCGTCTGG
ATGATGTCGC CGCTGAATAT CTGGAAGTGA
 
Protein sequence
MDALMNFGTG IFGGAWPAVW TLIKIVLIVA PMMLGVAYLT YFERKVIGYM QVRIGPNRVG 
PWGLIQPIAD GLKLLMKEII VPSGANKGIF IIAPMLAIAP ALAAWAVVPF TDSLVLANID
ASLLYIMAIT SMGVYGIILS GWASNSKYAF LGAMRSAAQM VSYEISMGFS LICVLMVSNS
LNLVEIVNVQ NQGRFAGWGL SFLSWNWLPL FPMFLVYLIS GVAETNRAPF DVAEGESEIV
AGFHVEYSGM AFAVFFLAEY ANMILVSALT SIMFLGGWLS PVSFLPDGIL WLFAKMSAIL
FLFLWFRATF PRYRYDQLMR LGWKVFVPIC LIWLVVVGVW MMSPLNIWK