| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0875 |
|---|
| Symbol | |
|---|
| ID | 3569938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 947438 |
|---|
| End bp | 947929 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637679333 |
|---|
| Product | colicin V production protein |
|---|
| Protein accession | YP_284101 |
|---|
| Protein GI | 71906514 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 0.592724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0357413 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGTT TTGACTACGT TGCGATCGGC ATCGTCGGTG TGTCGTTGAT CTTTGGTCTG
TGGCGGGGTG TGGTGGGCGA GATTATCGCG TTGGTCGCCT GGGTGCTGGC GATCTTCGCT
GCCGTGGAGT TCGGCGCGGT GGTCGGGCGA ACAGCATTTG CCGGCTTGTC TGATCCGGCT
TTGCGGACAC TGGCAGGTTG TGTGGTGATA TTTGTGGGTG TACTGGTCGT CATGGCCTTG
TTCCGGATGG CCGTGCGCAG CATGGTCAAG GCACTGGGCA TGTCCGTGTC GGACCGTATC
CTTGGTATGG TCTTCGGCCT GGTCCGTGGC GTACTGGTGT GTATGGTGCT GGTCGGCTTG
GGCGGGATGA CCTCGGCACC GATGCAGGCG TGGTGGCAGG ATGCGACCTT GTCGGCACCT
TTGGAAACTG TCGTTTTGGC AGCCAAGCCC TGGTTGCCAA ACGATTTGGC AAAACGAATT
CGATTCAGCT AG
|
|---|
| Protein sequence | MTGFDYVAIG IVGVSLIFGL WRGVVGEIIA LVAWVLAIFA AVEFGAVVGR TAFAGLSDPA
LRTLAGCVVI FVGVLVVMAL FRMAVRSMVK ALGMSVSDRI LGMVFGLVRG VLVCMVLVGL
GGMTSAPMQA WWQDATLSAP LETVVLAAKP WLPNDLAKRI RFS
|
|---|
| |