| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0836 |
|---|
| Symbol | |
|---|
| ID | 3569651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 907662 |
|---|
| End bp | 908438 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637679292 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_284062 |
|---|
| Protein GI | 71906475 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 79 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0173978 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACCCA AAAGAAAAAC CACCCAGCAC TCTGTCGATA TCAGCGAAGA AGCCGGCGTG
CGTTATCTGC ACTTCGGCTC GGACTGGATT CAGGGCGCCA TGCGCATTGC GCGCCCGTGG
TCGCTGGAAC TGGCCTATAC CCGCGAAATG ATGGCCGGGC TGTTGCTCCG CCCCCTGCAC
CATTGGCCGC GCCATGTGTT GCTGATCGGC CTCGGCGCAG GCTCCCTGGC CAAGTTCATC
TATCGCTATC TGCCCAACTG CCGGATTACG GTGGTCGAGA TCAATCCACA GGTTGAATTC
ATTGCCCGGC AATACTTCAA ATTACCGGAC GATCCGCTAC GCCTCGATGT CAGCATAGGC
TGCGGCGCCG ATTTCATGCT GGGCGGCACG AGCCGCTTCG ACCTGATCCT GATCGACGGC
TACGACCCTG AGGGGCGGGC CGGTGTGCTG GATACCGAGC CGTTCTACCA AGCCTGTCGC
GCCCGGCTGA GTGACAACGG TCTGTGTGGA CTGAACCTGC TCGGCTGGAA CAGAGGCTTT
CAGGGAAGCG TCGAACGTAT CCGGAGCGCC TTCGACGAGC GAGTCGCCGT TTTCCCCTCG
TGCGATAGCG GCAACACCAT CGCTTTTGCT ACTGGTGGCA ATCCGGTCGA TGTATCGCTG
GATGACATGC GCGCCTGCGC CGTGCAACTA AAAAAAGAAA CCCGCCTCGA CCTTTTGCCA
ACCCTCAGCC GGATACAGTT CGCGTATCCC TTGCCAGACG GTCGTCTCCA GATCTGA
|
|---|
| Protein sequence | MRPKRKTTQH SVDISEEAGV RYLHFGSDWI QGAMRIARPW SLELAYTREM MAGLLLRPLH
HWPRHVLLIG LGAGSLAKFI YRYLPNCRIT VVEINPQVEF IARQYFKLPD DPLRLDVSIG
CGADFMLGGT SRFDLILIDG YDPEGRAGVL DTEPFYQACR ARLSDNGLCG LNLLGWNRGF
QGSVERIRSA FDERVAVFPS CDSGNTIAFA TGGNPVDVSL DDMRACAVQL KKETRLDLLP
TLSRIQFAYP LPDGRLQI
|
|---|
| |