Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0811 |
Symbol | |
ID | 3569436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 880522 |
End bp | 881241 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637679267 |
Product | cytochrome c1 |
Protein accession | YP_284037 |
Protein GI | 71906450 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.000000393598 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000113285 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAT TCCTTATCGC ATTGCTCTTC GCACCGATCA TGGCATTTGC CAGCGGTAGT ACGGCCCACA TCGACAAGTG GCCGGGCTCC GTTAGCGACA AGGCTTCGTT GCAGAATGGC GCCAAGCTGT TCGTCAATTA CTGCCTGAAT TGCCACGGTG CGTCTTACCT GCGCTACAAG AATCTGCTGG ACCTCGGTCT GACCGAGCAG CAGGTCAAGG AAAACCTGAT GTTCACGTCT GACAAGATTG GTGAACTGAT GCGGGTTGCT GCGCGTTCCG ATGAGCAAAA GTTGTGGTTT GGCGCTACCC CGCCTGACCT GACCATCGTG GCCCGCGCCC GTGGTGAAGC CGGCAACGCT GCGGCTGGTG CTGACTGGCT TTACACCTAC TTGCGTTCCT TCTATCGCGA CGAGAACCGT CCGACTGGCT GGAATAACGT AGTGTTCGAA AATGTCGGTA TGCCGCATGT ACTGTACGGG CTGCAGGGTC AGCAAGTGCG CAATCACGAA ACGCACAAGC TGGAACTGGC TGTTCCTGGC TCGATGGCGC CGGCAGAATT CGACAAGTCG GTTTCCGATC TGGTCGGCTT CATGGTCTGG ATGGCTGAGC CCCAGCAGGA GTTCCGTCGG ACGCTGGGCT TTTTCGTTCT TGGCTTCCTG GCAGTCCTCT TCGTCGTTGC TTACGCACTG AAGAAGGAAT ACTGGAAAGA TATTCACTGA
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Protein sequence | MKKFLIALLF APIMAFASGS TAHIDKWPGS VSDKASLQNG AKLFVNYCLN CHGASYLRYK NLLDLGLTEQ QVKENLMFTS DKIGELMRVA ARSDEQKLWF GATPPDLTIV ARARGEAGNA AAGADWLYTY LRSFYRDENR PTGWNNVVFE NVGMPHVLYG LQGQQVRNHE THKLELAVPG SMAPAEFDKS VSDLVGFMVW MAEPQQEFRR TLGFFVLGFL AVLFVVAYAL KKEYWKDIH
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