Gene Daro_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0811 
Symbol 
ID3569436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp880522 
End bp881241 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content56% 
IMG OID637679267 
Productcytochrome c1 
Protein accessionYP_284037 
Protein GI71906450 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.000000393598 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000113285 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAT TCCTTATCGC ATTGCTCTTC GCACCGATCA TGGCATTTGC CAGCGGTAGT 
ACGGCCCACA TCGACAAGTG GCCGGGCTCC GTTAGCGACA AGGCTTCGTT GCAGAATGGC
GCCAAGCTGT TCGTCAATTA CTGCCTGAAT TGCCACGGTG CGTCTTACCT GCGCTACAAG
AATCTGCTGG ACCTCGGTCT GACCGAGCAG CAGGTCAAGG AAAACCTGAT GTTCACGTCT
GACAAGATTG GTGAACTGAT GCGGGTTGCT GCGCGTTCCG ATGAGCAAAA GTTGTGGTTT
GGCGCTACCC CGCCTGACCT GACCATCGTG GCCCGCGCCC GTGGTGAAGC CGGCAACGCT
GCGGCTGGTG CTGACTGGCT TTACACCTAC TTGCGTTCCT TCTATCGCGA CGAGAACCGT
CCGACTGGCT GGAATAACGT AGTGTTCGAA AATGTCGGTA TGCCGCATGT ACTGTACGGG
CTGCAGGGTC AGCAAGTGCG CAATCACGAA ACGCACAAGC TGGAACTGGC TGTTCCTGGC
TCGATGGCGC CGGCAGAATT CGACAAGTCG GTTTCCGATC TGGTCGGCTT CATGGTCTGG
ATGGCTGAGC CCCAGCAGGA GTTCCGTCGG ACGCTGGGCT TTTTCGTTCT TGGCTTCCTG
GCAGTCCTCT TCGTCGTTGC TTACGCACTG AAGAAGGAAT ACTGGAAAGA TATTCACTGA
 
Protein sequence
MKKFLIALLF APIMAFASGS TAHIDKWPGS VSDKASLQNG AKLFVNYCLN CHGASYLRYK 
NLLDLGLTEQ QVKENLMFTS DKIGELMRVA ARSDEQKLWF GATPPDLTIV ARARGEAGNA
AAGADWLYTY LRSFYRDENR PTGWNNVVFE NVGMPHVLYG LQGQQVRNHE THKLELAVPG
SMAPAEFDKS VSDLVGFMVW MAEPQQEFRR TLGFFVLGFL AVLFVVAYAL KKEYWKDIH