Gene Daro_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0782 
Symbol 
ID3569281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp847662 
End bp849020 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content56% 
IMG OID637679231 
Productflagellar hook-associated protein 2, N-terminal:flagellar hook-associated 2, C-terminal 
Protein accessionYP_284008 
Protein GI71906421 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00764259 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACCA TTACCTCACT AGGCGCTGGC TCGGGGCTCG ACCTTGAGTC CCTGGTCACC 
AAGCTCATGT CGGTCGAAAA AGCGCCTCTC AACGCCCTCA CGAAGAAGGA AAGCGCGGTT
AACACCAAGA TTTCTGCCTT CGGCACCCTG TCGAGCAAGT TGTCCGCACT GCAAACCGCC
GCCCAAGCGT TGAAGGCCAA CATAGGGCAA ACCGCGCTCC AGAAGTTCGC CACCTACAGT
ACGACCGTTG CCGATACCAG CATTGCCTCT GCCACTGCAG GGACAGGTGC GGTGGCCGGC
ACCTACACGC TGAATGTCAC CAAACTGGCG GTTTCCGACC AGTTTGTCTC AAACACCGTA
ACGTCAACCA GTGATCCGAT TGGCACCGCT GGCGACACCC TGACGTTCGC TTTTGCGACC
CCCGATGCCA ATGGCAACAG CCGTTCGAAG ACAATTACGC TTGATAGCAG CAACAATTCA
CTCACCGGCC TGCGTAATTC CATCAATGGC GCAAACATGG GCATTACGGC GACCATCATC
ACGGGAAGCG CTGGCGCACA ACTGGTCCTC ACCGGCGAAC AGGGTCTCGA TAACAAGATC
ACACTAGGCG GCAATCTAGC CAGCCAGCTG ACCCAGACGG CAACTGCAGA TAGTGCAGCC
TTCACGGTAA ACGGCATTGC CGCCACCAGC AATACGAATG CAGCCAGCAA GGTCATCGAT
GGCGTGACGC TCAATTTGAC CAAAACCGGT TCGACGACGC TCACCGTCGC TGCGGAGTAT
TCAAGCAATC TGTCGACTGC GCTGAACAGC TTCATCAAGG CCTACAACGA TGCCAACAGC
ACCATGGCCA CCATGGGTGC TTACAACGCC ACGACCAAGG TCGCCGGTGC CCTACAGGGC
AACTCGCTTC TGCAGGACGC GCGGCAGCAA ACACGCAGCC TGGTCTTTGG TACCACTGTC
GGCGGCACAT CTGCTTATCA GAGACTGTCT GATATCGGCG TATCCGTCGG CACCGATGGC
TCTCTGTCTC TCGACACAAC CAAGCTGAAC AAGGCGCTTG CCTCCGACAC GGTCTCCGTG
GCAACCTTGG TCGACAAGGT CGGCTCTGCC TTCAATACAA CACTGGAGCA GGTAGTTGGA
ACAACGGGCA AAATAAAGAT TGCCACCGAT AGTGCAAATT CGATGATCAA GGAATTGCAA
AAGCGAGAAG ATGCTGTGCA ACTCCACCTT GATCAAATTG AAGCGCGTTA TCGCAAACGG
TTCACGGCTA TGGATACGCT AGTCGCCAAG CTCAATTCGA CCAGCACCTA TCTAACCACG
CAACTGGCCA ATCTGACCAG CAGCACATCA AGCAAGTAG
 
Protein sequence
MATITSLGAG SGLDLESLVT KLMSVEKAPL NALTKKESAV NTKISAFGTL SSKLSALQTA 
AQALKANIGQ TALQKFATYS TTVADTSIAS ATAGTGAVAG TYTLNVTKLA VSDQFVSNTV
TSTSDPIGTA GDTLTFAFAT PDANGNSRSK TITLDSSNNS LTGLRNSING ANMGITATII
TGSAGAQLVL TGEQGLDNKI TLGGNLASQL TQTATADSAA FTVNGIAATS NTNAASKVID
GVTLNLTKTG STTLTVAAEY SSNLSTALNS FIKAYNDANS TMATMGAYNA TTKVAGALQG
NSLLQDARQQ TRSLVFGTTV GGTSAYQRLS DIGVSVGTDG SLSLDTTKLN KALASDTVSV
ATLVDKVGSA FNTTLEQVVG TTGKIKIATD SANSMIKELQ KREDAVQLHL DQIEARYRKR
FTAMDTLVAK LNSTSTYLTT QLANLTSSTS SK