Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0690 |
Symbol | |
ID | 3568983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 760413 |
End bp | 761702 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637679138 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_283916 |
Protein GI | 71906329 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 63 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.780373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTAC ACGCGAAAGC GAAGTCGGAA TCTGGATATC GTTTCTACGC GCTGTACGAC AAGATTTATC GCACGGATAT TTTGGCGCAT GCCTATGCCC AGTGCCGCTC CAATAAGGGC GCGCCGGGTG TGGATCGTCA GGATTTCGAG GATGTCGAGG CGTATGGTGT GCGGCGATGG CTGGAGGAAC TGGCGCTTGC GCTCAAAGAG GAGAGCTACC GACCGGATCC AATTCGGAGA GTGTTTATCC CGAAAGCCAA TGGCAAGTTA AGGCCTCTGG GCATTTCAAC GCTGCATGAT CGAGTGTGTA TGACAGCAGC CATGCTGGTA CTCGAACCTA TCTTTGAAGC TGATCTTCCT GATGAACAGT ATGCCTACCG GCCGGGCCGC AATGCCCAGC AGGCGGCAGA AGAAGTGAAG AACCGGCTCT ACCTTGGACA AACGGACGTT GTCGATGCCG ACCTGTCGGA CTACTTCGGC AGCATTCCAC ATTCTGAACT GATGAAGTCG CTGGCGCGAC GCATCGTGGA TCGGCGTGTG CTACATCTTA TCAAGATGTG GCTGGAGTGC GCGGTTGAGG AAACCGATCA GCGAGGACGG AAGAAACGGA CGACCGAGGC CAAAGATCAG GGGCGAGGTA TCCCGCAAGG CTCACCGATC TCGCCGCTGC TATCGAATTT GTATATGCGG CGGTTTGTGC TGGCGTGGAA GAAACTGGGG TTGGAGCGAA GCCTTGGCAG TCGCATCGTC ACCTATGCCG ACGACCTCGT GATCCTGTGC AAGTGTGGCA AGGCGGAAGA AGCCTTGCAA TGGATGCGCA CGATCATGGG GAAACTGAAG CTCACGGTGA ACGAGGAAAA GACACGAATC TGTCAGGTAC CGGCAGGGAC GTTCGACTTT CTGGGTTACT CGTTTGGACG GCGATATGTG CCGCGCACAG GGAAGCCGCA GATCGCTCTG TGGCCGTCGA AGAAAAGCAT TCGACGCATG GTGGAGAAAA TCCATGACAT GACTGAGCGG CAAACGGGTT GGCAAGAGAC CACGGAGCTG GTGGGCAAGT TGAATCGGAC GCTACGCGGC TGGGCGAACT ACTTCAGTGT AGGGAACGTC AGTCGCGCCT ATCGTGCGCT CGACAGTTAC ACGGCAACGC GGTTGCGTCG GTGGTTGCGC TACAAGTACA AGCTCAGACA TTGCAAGGGC GGGAGCTATC CACTCTCGCA CCTCTACGGG TACTTTGGTC TCGTACGTCT GGGCGCACGT GGGCGCAGCG AGGCGTGGGT GAAGGCGTGA
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Protein sequence | MALHAKAKSE SGYRFYALYD KIYRTDILAH AYAQCRSNKG APGVDRQDFE DVEAYGVRRW LEELALALKE ESYRPDPIRR VFIPKANGKL RPLGISTLHD RVCMTAAMLV LEPIFEADLP DEQYAYRPGR NAQQAAEEVK NRLYLGQTDV VDADLSDYFG SIPHSELMKS LARRIVDRRV LHLIKMWLEC AVEETDQRGR KKRTTEAKDQ GRGIPQGSPI SPLLSNLYMR RFVLAWKKLG LERSLGSRIV TYADDLVILC KCGKAEEALQ WMRTIMGKLK LTVNEEKTRI CQVPAGTFDF LGYSFGRRYV PRTGKPQIAL WPSKKSIRRM VEKIHDMTER QTGWQETTEL VGKLNRTLRG WANYFSVGNV SRAYRALDSY TATRLRRWLR YKYKLRHCKG GSYPLSHLYG YFGLVRLGAR GRSEAWVKA
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