| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0685 |
|---|
| Symbol | |
|---|
| ID | 3568978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 755852 |
|---|
| End bp | 757459 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637679133 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_283911 |
|---|
| Protein GI | 71906324 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAA TGGAAACAAA ACCACTTCGC AGATTGCTCA ATCCCATGTT GCGCCTGACC
CAGTTGCTCG CGTTTATAGC CGCATACATT GCGCTCGACT GGGCGAGCTA TATCCATCCG
CTTCTCGGGC TGAACATCAC GCTATGGAAC CCAGCACCTG CCTTGGGCTT GGCCTTGTGG
ATGCGCTTTG GGCGCATCAC AGCGATTCCG TGGTTTGTTG CCATCATGGC TGGGGAGTTT
TTCATCCGCG CCATGCCCGC CGCTTTTTTG ATGACCGTCG TATTGTCAAT GGTCTTGACG
ATTGGCTACG GCGCAATCGG TGAGTTTCTA CGCAGACGAC TTCGCCATGG CGAGGTATTT
GGTGATCGCA TTCACCTGAC GACCTGGCTC AGCATTGTGG TCATCGGCAC ACTTATAAAT
AGTTTGAACT ACATTTCCCT GCTGGCGCTG ACGGGCCTTC TGCCCGCGGG GGATCGGATT
GATGGGTTGA TCCGATTCTG GGTCGGCGAT TGCGTCGGGA TCGTCGTCAG TATGCCCATG
CTGTGGATGC TGTTAACCCA CTCGGGCCAA GCTCGACTTC GCAGCGTCCT TTCAAGTTGG
GAGACAGGTG GCTATACCGC GTTGGCGGTG GCCATGCTCT GGGTGACTTT TGGAAACGGT
GCCTCTGCTG AATTTCAGTA TTTCTACTTC CTCTTCCTGC CGGTTATCTG GGCGGCGGCT
CGCCAAGGCC TATCGGGTGC CGCTACTTCG GCCTTCATTT TGCAGGCCGG CATTATCTTC
GCTGTCGAGT GGTTGGATCT TGTCGCAGTC ACCGTTCTGG AGTTCCAGAT GCTGGGTGCC
GTGCTGGCGC TGGTTGGCTT CTTCATCGGC GTAGTGGTCG ATGAACAGCG TTTAGCCGTG
GAAAAGCTCA AGCAGACATT GCACCTGGCA GCAGCTGGCG AGATGGCTGG CGCATTAGCT
CATGAGCTAA ATCAGCCGAT GACTGCTCTG GCGGCATACG GGAATGCTTG CGAATACCTC
CTGGAGCGCG GGGAAACTGG TGAAGTGCTA CGCGACGCAA TCCGGCGGAT GGTTGCCGAA
TCCGGACGGG CGGCTGAGGT CGTTCGTCGG GTACGTGACT TTTTCCGGAC CGGTGCAACA
CGACTTGAGT TGATCGACGT TGGCACGCTC ATCTCCTCGG CGGCAAGCCG ATTTGCCGAC
CGTGCTGTCA GCGAAGGGGT TCAACTTCGC CTTGAGGAAG CAGCAACCAC CGTGCGGGTT
GATCGCCTGC AAATCGAACT GGTTTTGCGT AACTTGCTGG CCAATGCTTT CGACGCAATT
GCATTACGAC CCGAGGGGCC GCGGCACATC AACGTGACCG TTGATGCTGA GACCGATGAC
ACCGTTACCA TCACGGTAAG CGATAGCGGT CATGGCCTCT CTGCAAGTGC AGTTGGCAGT
CTGTTCGAGC CGTTCACCTC GTCGAAGTCG AGCGGCCTCG GATTGGGGCT CGTTATTAGT
CGCGCATTGG TTGAGGCGCA TGGTGGCCAG CTTTGGGCAC AACCAGGCGA CAGCGGGGTA
TTCCGGTTCT CGCTGCCCAC TCATGAAAAA GGGACGAATG ATGCCTAA
|
|---|
| Protein sequence | MTRMETKPLR RLLNPMLRLT QLLAFIAAYI ALDWASYIHP LLGLNITLWN PAPALGLALW
MRFGRITAIP WFVAIMAGEF FIRAMPAAFL MTVVLSMVLT IGYGAIGEFL RRRLRHGEVF
GDRIHLTTWL SIVVIGTLIN SLNYISLLAL TGLLPAGDRI DGLIRFWVGD CVGIVVSMPM
LWMLLTHSGQ ARLRSVLSSW ETGGYTALAV AMLWVTFGNG ASAEFQYFYF LFLPVIWAAA
RQGLSGAATS AFILQAGIIF AVEWLDLVAV TVLEFQMLGA VLALVGFFIG VVVDEQRLAV
EKLKQTLHLA AAGEMAGALA HELNQPMTAL AAYGNACEYL LERGETGEVL RDAIRRMVAE
SGRAAEVVRR VRDFFRTGAT RLELIDVGTL ISSAASRFAD RAVSEGVQLR LEEAATTVRV
DRLQIELVLR NLLANAFDAI ALRPEGPRHI NVTVDAETDD TVTITVSDSG HGLSASAVGS
LFEPFTSSKS SGLGLGLVIS RALVEAHGGQ LWAQPGDSGV FRFSLPTHEK GTNDA
|
|---|
| |