| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0559 |
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| Symbol | |
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| ID | 3568884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 619858 |
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| End bp | 623328 |
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| Gene Length | 3471 bp |
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| Protein Length | 1156 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637679002 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_283786 |
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| Protein GI | 71906199 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.77827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCC CGCGCTACGT TCACCTCCGT CTCCATTCCG AATATTCAGT CACCGACGGC
ATCGTCCGGG TTGGTGATGC CGTCAAGCGC GCCGCCGGCG ATAGCATGCC GGCCATGGCG
ATGACCGACC TGGGCAATCT GTTCGGCTTG GTCAAGTTCT ATACCGGGGC GCGGGGCAAG
GGGGTCAAGC CGATTGCCGG GGCGGATGTC TGGATCACCA ATCCGGATGC GCCGGAGGAT
GCCTATCGGC TGTTGCTGCT GGTACGTAAC CGGGTCGGTT ACCAGCAGTT GTGCGAACTG
CTGACCAAGG CCTATCTGGT CGAAGGCCGA CGTGACCGGG CCGAAATTCG TCGCGAGTGG
TTTGCCGAGC TCGGCAGCGA TGGCCTGATT GCCTTGTCTG GCGCGCATCT CGGCGATATC
GGCGAGGCCC TGCTGAACGG TAATTTCGAT CTGGCTGGCG AACGGGCCAA GGCCTGGGAG
GCGATTTTCC CCGGCGCTTT CTACCTTGAA GTGCAGCGCT ATGGCCAGCC GCAGCAGGAG
GCCATCGTCC AGCAAACGGC TGATCTGGCC GGTGAGCTTG GCTTGCCGCT GGTCGCGACG
CACCCGATCC AGTTCATGAA TCGCGATGAC TTCCGGGCGC ACGAGGCGCG GGTCTGCATT
GCCGAAGGTT ATGTGCTGGG CGATACGCGC CGCCCGAAAC TCTATACCGA GGAACAGTAC
TTCAAGACCC AGGCCGAGAT GGTCGAGCTG TTTGCCGACC TGCCGGAAGC GCTGGAAAAT
ACCCTCGAAA TCGCCAAGCG CTGCAATCTG ACGATGACCC TGGGCAAGAA CTTCCTGCCC
GATTTCCCGA TTCCGCCGGG CATGACCGAC GGCGAATATC TGGTCCAGGA GGCGAAGAAG
GGGCTGGAAG TCCGCCTCGC CGAGCTGTAT CCGGACCCGG AGGTGCGCCA GCAGCGCCGG
CCGGAATACG ACGAGCGCCT GGTTTTCGAG TGCAAGACAA TTCTGCAGAT GGGCTTCCCG
GGTTACTTCC TGATCGTGGC CGACTTCATC AACTGGGGCA AGAAAAACGG CGTCCCGGTC
GGGCCGGGCC GGGGTTCGGG TGCCGGTTCG CTGGTGGCCT ACTCGCTGCG CATCACCGAC
ATCGACCCGC TGGAGTACGC GCTGCTCTTC GAGCGTTTCC TGAATCCGGA ACGGGTATCG
ATGCCCGACT TCGATATCGA CTTCTGCCAG GACAACCGCT GGCGGGTGAT CGAATACGTT
CGCGAGCACT ACGGTGCCGA TGCGGTCAGC CAGATCGCCA CCTTCGGCAC GATGTCCTCG
AAGGCGGTGA TCCGCGACGT TGGCCGGGTG TTCGGCCTGC CCTACTCGAT GTGCGATCGT
ATTTCCAAGC TGATCCCGAT CGTCCAGAAC AAGCCGGTGT CGCTGGCTGA GGCGCTGGAG
CAGGAGCCGC AGCTCAAGCA GATGATGGAA GGCGACGGGG ATGGCGAGAC CATCCGCGAA
CTGTTCGACC TGGCCGGTCG CCTCGAAGAC TTGACCCGCA ACGTCGGCAT GCACGCTGGC
GGCGTGCTGA TCGCGCCGGG CAAGATCACC GATTTCTGTC CGATCTACCA GGCGACTGGC
GCCGATGCCT CGCCGGTCTC ACAGTTCGAC AAGGACGACG TCGAGAAGGC CGGTCTGGTC
AAGTTCGACT TCCTTGGTCT GCGCAACTTG ACGATTATCG AGCTGGCCGT CGAGTACATC
CGCCGGATGA CCGGCGAGAA GCTCGACCTG ATGTCGCTTG GTTTCAAGGA CCCCGCGGCC
TACCAGATCC TGAAAGATGC CAACACGACG GCGATCTTCC AGGTTGAATC GGAGGGCATG
AAGAAGCTGC TCAAGAAGCT GGCGCCCGAC CGTTTCGAAG ACATCATCGC TGTGCTCGCG
CTCTATCGTC CCGGCCCGCT CGGTTCCGGG ATGGTGGACG ACTTCATCCT GCGCAAGAAG
GGTCAGCAGA AGATCGACTA TTTCCACCCC GACCTGACTG CCTGCCTGTC GCCGACCTAC
GGCGTCATCG TGTACCAGGA ACAGGTGATG CAGATCTCGC AGATCATCGG CGGCTACACG
CTGGGTGGCG CCGACATGCT GCGCCGGGCG ATGGGCAAGA AAAAGCCCGA GGAAATGGCC
AAGCACCGGG AGACCATCGC CCAGGGCGCC AAGGAAAAAG GCTACGACCC GGCGCTGGCC
GAGCAGCTGT TCGACCTGAT GACCAAGTTT GCGGAGTACG GCTTCAACAA GTCGCACACC
GCCGCTTATG CAGTGGTCAC CTATCACACT GCCTGGCTCA AGGCGCATCA CTGCGCGGCC
TTCATGGCGG CGACGATGTC GTCCGATCTC GACAACACCG ATTCGGTGAA GATCTTTTAC
GAAGACACCA TCGCCAACAA GATCAAGGTG CTCGGGCCGG ACGTCAATGT CTCGAATTAC
CGTTTCGAGC CGGTCGACCG CGGCACCATT CGCTATGGCC TGGGGGCGGT CAAGGGCACC
GGCGAGCAGG CGGTCAATGT CATTCTCAAG GCACGGGCCG AGGGCGGTCC CTTCAAGGAC
CTCTTCGACT TCTGCATGCG TTGCGACAAG CGCATGGTCA ATCGCCGGAC CACCGAGGCG
CTGATCAAGG CCGGGGCTTT CGATACCATC GCACCTGAAA TCGCGCCGGG GAAGGGGGCG
GATCGCTGCA AGCTGCTGGC CACCGTCGGC GTGGCCATGG ATTTCGCCGA GCAGGCCGAG
CGCAATGCGA TGCAGACCAG CCTGTTCGAT ATGGCTGACG TGGCCGATGA GCATGCGCCG
GAATACGTCA ACGTCCGGCC ATGGGACGAA AAGACCAAGC TGATGGAAGA GAAGACGGCA
CTCGGTTTCT TCTTCTCCGG GCATCCCTAC AACACTTGCA AGAAAGAGCT GTCGCGTTTC
ATTCGCCGGC CACTCAACCG TCTCGAACCG GCCAAGGAAA TGACGACCAT TGCCGGTCTG
GTCGTCGGCG TCCGCACCCA GATGACCCGG CGCGGCAAGA TGCTGTTCGT GCAGCTGGAC
GACGGGACCG GGATGGTCGA GGTCTCGGTC TTCAATGAAC TGTTCGAGGC CGAACGCGCC
AAGATCGTCA CCGATGAAGT GCTGGTGATC GAAGGCAAGG TCAGTTACGA CGACTTCTCC
GGTGGCAACC GCGTCGTCGC CGACAAGCTG ATGACGCTGG GCGAGGCCAG GGCGCGTTTT
GCCCGGCATC TGCTGCTCAA GATGAACGGC AACGCTGATG CCCAACGGCT GAAGTCGTTG
CTGACGCCTT TCGCGCCAGG CTCGGCGCCA GTGCGTATCC GTTATCGCAA CGAGCTTGCC
GAATGCGAAC TGGTGCTCGG CGCGGCCTCG CGCGTCCGGC TCGACGATGC CTTGCTCGAG
GCGCTGAACG GCTGGCTGCA GCCGGAAAAC GTCGAGATCG TATACCAATG A
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| Protein sequence | MNSPRYVHLR LHSEYSVTDG IVRVGDAVKR AAGDSMPAMA MTDLGNLFGL VKFYTGARGK
GVKPIAGADV WITNPDAPED AYRLLLLVRN RVGYQQLCEL LTKAYLVEGR RDRAEIRREW
FAELGSDGLI ALSGAHLGDI GEALLNGNFD LAGERAKAWE AIFPGAFYLE VQRYGQPQQE
AIVQQTADLA GELGLPLVAT HPIQFMNRDD FRAHEARVCI AEGYVLGDTR RPKLYTEEQY
FKTQAEMVEL FADLPEALEN TLEIAKRCNL TMTLGKNFLP DFPIPPGMTD GEYLVQEAKK
GLEVRLAELY PDPEVRQQRR PEYDERLVFE CKTILQMGFP GYFLIVADFI NWGKKNGVPV
GPGRGSGAGS LVAYSLRITD IDPLEYALLF ERFLNPERVS MPDFDIDFCQ DNRWRVIEYV
REHYGADAVS QIATFGTMSS KAVIRDVGRV FGLPYSMCDR ISKLIPIVQN KPVSLAEALE
QEPQLKQMME GDGDGETIRE LFDLAGRLED LTRNVGMHAG GVLIAPGKIT DFCPIYQATG
ADASPVSQFD KDDVEKAGLV KFDFLGLRNL TIIELAVEYI RRMTGEKLDL MSLGFKDPAA
YQILKDANTT AIFQVESEGM KKLLKKLAPD RFEDIIAVLA LYRPGPLGSG MVDDFILRKK
GQQKIDYFHP DLTACLSPTY GVIVYQEQVM QISQIIGGYT LGGADMLRRA MGKKKPEEMA
KHRETIAQGA KEKGYDPALA EQLFDLMTKF AEYGFNKSHT AAYAVVTYHT AWLKAHHCAA
FMAATMSSDL DNTDSVKIFY EDTIANKIKV LGPDVNVSNY RFEPVDRGTI RYGLGAVKGT
GEQAVNVILK ARAEGGPFKD LFDFCMRCDK RMVNRRTTEA LIKAGAFDTI APEIAPGKGA
DRCKLLATVG VAMDFAEQAE RNAMQTSLFD MADVADEHAP EYVNVRPWDE KTKLMEEKTA
LGFFFSGHPY NTCKKELSRF IRRPLNRLEP AKEMTTIAGL VVGVRTQMTR RGKMLFVQLD
DGTGMVEVSV FNELFEAERA KIVTDEVLVI EGKVSYDDFS GGNRVVADKL MTLGEARARF
ARHLLLKMNG NADAQRLKSL LTPFAPGSAP VRIRYRNELA ECELVLGAAS RVRLDDALLE
ALNGWLQPEN VEIVYQ
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