| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0459 |
|---|
| Symbol | |
|---|
| ID | 3569124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 503769 |
|---|
| End bp | 506852 |
|---|
| Gene Length | 3084 bp |
|---|
| Protein Length | 1027 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637678901 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_283686 |
|---|
| Protein GI | 71906099 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTTT CGTCCTGGTC GATCCGGAAC CCGACGCCGG CGATTCTGTT CTTTGTCATG
CTGACCCTGG CAGGGGTCAT GGCCTTCAAG GCGATGAAGA TCCAGCAGTT CATGGACATC
GATCTGCCGA CCGTGACGGT GACGGCCAGC CTGCCCGGCG CTGCGCCGGC CCAGATGGAA
ACCGAGGTGG CGCGCAAGAT CGAGAATTCG GTGGCGACGC TGCAGGGCAT CAAGCACATT
TACACCAAGG TGCAGGACGG CACGGCCATC GTGACCGTCG AGTTCCGCCT GGAAAAGCCG
ACGCAGGAAG CGATCGATGA TGTCCGCGAT GCGGTTTCCC GTATCCGTGC CGATTTGCCG
GGAGATTTGA AGGACCCGGT GATCAGCAAG GTCAATCTGT CCGGCGCCCC GATCCTGACC
TACACGGTCG CTTCCAGTCG GATGGATGAC GAGGCCTTGT CCTGGTTCGT CGATAATACG
GTGACCAAGG CGCTGCTCTC GGCGCGCGGT GTGGGCGCCG TGTCGCGGGT TGGCGGCGTG
ACGCGGGAAA TCCGCATCGA ACTCGATCCG GCCAAGCTGC TGGCGCTGCG CGCCACGGCC
GCGGATATTT CCCGGCAGTT GCGGCAGATT CAGCAGGAGG CTTCGGGCGG CCGTTCCGAC
GTGGGCGGCA TCGAGCAGTC GGTGCGTACC ATCGCCACGG TGAAGAGTGC CGACGAACTG
GGCGCCATGG ACATCGTGCT AAGCGATGGC CGGCATCTCC GGGTCGATCA GGTGGCCAGC
GTCATCGATA CGGTCGGCGA ACAGCGGACG ACGGCACTGC TCAACGGCAA GCCGGTGGTC
GGCTTCGAGA TTACTCGCAG CAAGGGCGCC GGCGAGGTCG AGGTGGCGGA CAACGTCAAG
CGCTCCCTGG ACAAGCTGCA GGCGGAGCAC CCGGACATCG CGATCACCGA AGCCTTCAAT
TTTGTCGACC CGGTCATCGA AAACTACGAC GGCTCGATGA AGCTGCTGAT CGAAGGCGCG
CTGCTTGCCG TGCTGGTCGT CTGGCTCTTC CTGCGCGATG GCCGGGCGAC GTTTGTGGCC
GCCGCTGCGC TGCCCTTGTC GGCGATTCCG ACCTTCGCGG CGATGTACCT GATGGGCTTC
ACGCTCAATG TCGTCACCCT GCTCTCGATG TCGCTGGTCG TCGGTATTCT GGTCGATGAC
GCGATTGTCG AGATCGAGAA CATCATGCGC CACCTGCGCA TGGGCAAGTC GCCGTACCAG
GCAGCCATGG AAGCGGCCGA CGAGATCGGC CTGGCGGTGA TCGCCACCAC CTTCACGCTG
ATTGCCGTTT TCCTGCCCAC TGCCTTCATG AGCGGCGTGG CTGGCAAGTT CTTCGTGCAA
TTCGGGTGGA CCGCGGCCAT TGCCGTCTTC TTCTCGCTGG TCGTCGCTCG CATGCTGACG
CCGATGATGG CCGCCTACCT CCTGAAACCG GTCAGCCACA CCGAAGCGAC ACCGGGCTGG
CTGAAGCGCT ATGAGGGCTG GGCGGCCTGG TGCCTGCAGC ACCGCATCGT GACCCTGCTC
GCCGCCGCCG CCTTCTTTGT CGGTTCCTTC ATGCTGGTGC CGCTGCTGCC CAAGGGGTTC
ATGCCACCGG ACGATCTGTC GCAGACGCAA ATCTACCTGT CGCTGCCGCC GGGCGCGACC
TTCCAGGAGA CGCTGGCCGC CGCCGAGCAG GCGCGGACCA TCGCCGAAGC CAATCAACAT
GTGAAGCTGG TCTACACCGC CGTGGGCGGC GGCAAGGCAG GCAGCGATCC CTTTGCGCCG
GCCGGTGCGG CCGAAGTCCG CAAGGCCACG CTGACGCTGA ATCTGACGCC GCGCGGCCAG
CGTTCCGGCA CCAGTAAGCA GGCGATTGAA AACCAGTTGC GCCAGGCGTT GACGGCGATC
CCCGGTGTGC AAGTGAAGGT TGGACTGGCT TCGGGTAACG CCAAATACAT TCTCGTACTG
GCCAGTGAAA ATGGCGCGCT GCTGTCGGAA CATGCCCGCG TCGTCGAACG CGAACTGCGG
ACAATTCCCG GTCTCGGCAA CATCACCAGC ACGGCCAGCC TGGTCCGTCC GGAATTGGTC
GTCCGCCCGG ATTTCGCCCG CATGGCCGAT CTCGGCGTCA CTTCGGCCGC CATCGCCGAC
ACCTTGCGCA TCGCCACGGC TGGCGATTAC GACCAGGGCC TTGCCAAGCT CAACCTTGCT
CAGCGCCAGA TACCCATTGT CGTCAAGCTG CCGCCGGCTG CCCGCACCGA CCTTGCCCTG
CTCGAACGCC TGAGTGTGCC CGGCGCCCAC GGCCCGGTCA TGCTCGCTAA CGTCGCGGCG
GTCAGCATTG GCGGCGGCCC GGCCGAAATC GACCGCTACG ATCGCCTGCG CAACATCAAT
TTCGAAATCG AGCTGAACGG CCAGCCGCTC GGCGAGGTTG AGGCGATGGC GCTCAAGCTG
CCCAGTCTGG CCAAACTGCC GCCCGGTGTC ATCCAGACGA CGGTCGGCGA TGCCGAGGCG
ATGGGCGAGT TGTTCACCAG CTTCGCCCTG GCCATGGCGA CCGGCGTGCT CTGCATCTAT
ATCGTGCTGG TCCTGCTGTT CAAGGATTTC GTCCAGCCGG TGACTATCCT GGCCGCGCTG
ATCCTGTCGG TGCCAGGGGC TTTCCTGGCC TTGTTCATCA CCCAGAAGGC AGTGTCGATG
CCGTCGATGA TCGGCCTGAT CATGCTGATG GGGATCGCCA CCAAGAATTC CATTCTGCTG
ATCGACTACG TGGTGCTGGC GCGGCGCGAA CACGGCCTGG ATCGCTGGAG TGCCTTGCTC
GATGCCTGCC GCAAGCGGGC GCGGCCGATC GTGATGACCA CCGTGGCAAT GGGCGCCGGC
ATGATGCCGA TCGCGCTCGG GCTGGGGGTT GATCCGAGCT TTCGCGCCCC GATGTCGATT
GTGGTCATTG GCGGCCTGAT TACCTCGACC TTCCTCAGTT TGCTGGTCAT CCCGGTGGTG
TTTACCTATG TCGATGACCT GATTCTCCTG GTCAGGACCA AGTTCAGTTC GTCGCGAAGC
CGACGACTAT CGCCTGAGAG ATAG
|
|---|
| Protein sequence | MNVSSWSIRN PTPAILFFVM LTLAGVMAFK AMKIQQFMDI DLPTVTVTAS LPGAAPAQME
TEVARKIENS VATLQGIKHI YTKVQDGTAI VTVEFRLEKP TQEAIDDVRD AVSRIRADLP
GDLKDPVISK VNLSGAPILT YTVASSRMDD EALSWFVDNT VTKALLSARG VGAVSRVGGV
TREIRIELDP AKLLALRATA ADISRQLRQI QQEASGGRSD VGGIEQSVRT IATVKSADEL
GAMDIVLSDG RHLRVDQVAS VIDTVGEQRT TALLNGKPVV GFEITRSKGA GEVEVADNVK
RSLDKLQAEH PDIAITEAFN FVDPVIENYD GSMKLLIEGA LLAVLVVWLF LRDGRATFVA
AAALPLSAIP TFAAMYLMGF TLNVVTLLSM SLVVGILVDD AIVEIENIMR HLRMGKSPYQ
AAMEAADEIG LAVIATTFTL IAVFLPTAFM SGVAGKFFVQ FGWTAAIAVF FSLVVARMLT
PMMAAYLLKP VSHTEATPGW LKRYEGWAAW CLQHRIVTLL AAAAFFVGSF MLVPLLPKGF
MPPDDLSQTQ IYLSLPPGAT FQETLAAAEQ ARTIAEANQH VKLVYTAVGG GKAGSDPFAP
AGAAEVRKAT LTLNLTPRGQ RSGTSKQAIE NQLRQALTAI PGVQVKVGLA SGNAKYILVL
ASENGALLSE HARVVERELR TIPGLGNITS TASLVRPELV VRPDFARMAD LGVTSAAIAD
TLRIATAGDY DQGLAKLNLA QRQIPIVVKL PPAARTDLAL LERLSVPGAH GPVMLANVAA
VSIGGGPAEI DRYDRLRNIN FEIELNGQPL GEVEAMALKL PSLAKLPPGV IQTTVGDAEA
MGELFTSFAL AMATGVLCIY IVLVLLFKDF VQPVTILAAL ILSVPGAFLA LFITQKAVSM
PSMIGLIMLM GIATKNSILL IDYVVLARRE HGLDRWSALL DACRKRARPI VMTTVAMGAG
MMPIALGLGV DPSFRAPMSI VVIGGLITST FLSLLVIPVV FTYVDDLILL VRTKFSSSRS
RRLSPER
|
|---|
| |