| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0372 |
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| Symbol | |
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| ID | 3569675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 405065 |
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| End bp | 406624 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637678814 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_283601 |
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| Protein GI | 71906014 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000000215542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000876373 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGCCGAA ATTCACCGGA GAGTGAACGC GTGACTAAGC AACCCCTTCC CCAACAGGCG
GTCATCGCCG TGGTCGGTAC TGGCGCCATG GGCGCCGGCA TCGCCCAGGT CGCCGCAGCG
GCCGGCCATC CGGTCAAGCT GCTCGATAAC CGGCCAGGCG CGGCTGACAA GGCTGTCGCC
GGTATCCGTG CGCAGTTCGC CAAGCTGGCC GAAAAAGGCA AGCTGACCAC CGAAGCCGCG
CAAGCGGCTG GCGAACGCCT GAGCGCTGTC GAGCAACTGG CCGATCTGGC CGATGCCGCA
CTGGTCGTCG AGGCCATCGT CGAGAACCTC GACGCCAAGC AGAAGCTGTA TGCCGATCTC
GAAGCCATCG TCGGTGCCGA CTGCATCTTC GGGACCAACA CCTCGTCGAT TTCGGTGACC
GCCATCGGCG CTGCGCTGAA GCATCCGGAG CGTCTGGCTG GTCTGCATTT CTTCAATCCG
GCCCCGTTGA TGGCGCTGGT CGAAATCGTT TCCGGCCTGG CGACCGATAA AGCGGTGGCT
GACACGCTGT TTTCCACGGC CAATGCCTGG GGCAAGACGG CCGTGCATGC CAAGTCGACG
CCCGGTTTCA TCGTCAATCG TGTCGCCCGT CCTTACTATG CCGAAGCGCT GCGCGTGGCG
CAGGAAGGCG CAGCCGACTA CGCCACGATC GATGCCTGCT GCCGTGAGGC TGGCGGCTTC
CGCATGGGAC CGTTCGAGCT GATGGATATG ATTGGCCACG ACGTCAATTT CGCCGTGACC
AACTCGGTGT GGCGTGCTTT CTACAACGAC CAGCGCTTCC TGCCTTCGCT GATCCAGCAG
GAACTGGTCG ATGCCGGGTT CTATGGCCGC AAGAGTGGAC GCGGCTTCTA CGACTACCGC
GAAGGTGCCG TGAAGCCCGA GCCGCAGACC GAAGCCGCGC AAACGCCGGC CGGCAAGATC
ACTGTTTTTG GCGAGTCCGA TCTGGCTGAA CTGCTGGTCG AGCGCCTGCA GCACTCCGCC
CTCTCCTACA ACCGGGCACC GGACAGCGAT GGCCGTATCG CCGAAATCGG CTTCGCCAAG
TTGTACGTGA CCGACGGTCG CAGTGCCACC CAACGTGCCG CCGAAACCGG CGTCGCCAAT
ACCGTGCTGA TCGACCTCGC GCTCGATTAC AGCAAGGCGA CCCGTCTGGC CATCGCCGCC
GCCGAGCAAT GCGAACCGGC CGCCGTCGCT TCGGCCGTCG GCCTGCTCCA GGCCACTGGT
TTCGCCGTGT CGCGCTTTCT CGATGTGCCG GGCCTGATCG TCATGCGCAC GGTGGCAATG
CTGGCCAATG AAGCGGCCGA TGCCGTCAAT CAGGGCGTCT GCTCCGAAGC CGGCGCCGAT
CAGGCCATGC GCCTCGGCGT CAATTATCCG CAAGGCCCGC TGGCCTGGGC CGATCAGGTC
GGTGTCGCTG CCATCCGCGA CGTGCTGGCC AATCTTGGTG CCAGCTACGG CGAGGACCGT
TATCGCATTT CGCCGCTGAT CCAGCGCGCC GTTTTTGCCG GAAGGAATAT CCATGACTGA
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| Protein sequence | MRRNSPESER VTKQPLPQQA VIAVVGTGAM GAGIAQVAAA AGHPVKLLDN RPGAADKAVA
GIRAQFAKLA EKGKLTTEAA QAAGERLSAV EQLADLADAA LVVEAIVENL DAKQKLYADL
EAIVGADCIF GTNTSSISVT AIGAALKHPE RLAGLHFFNP APLMALVEIV SGLATDKAVA
DTLFSTANAW GKTAVHAKST PGFIVNRVAR PYYAEALRVA QEGAADYATI DACCREAGGF
RMGPFELMDM IGHDVNFAVT NSVWRAFYND QRFLPSLIQQ ELVDAGFYGR KSGRGFYDYR
EGAVKPEPQT EAAQTPAGKI TVFGESDLAE LLVERLQHSA LSYNRAPDSD GRIAEIGFAK
LYVTDGRSAT QRAAETGVAN TVLIDLALDY SKATRLAIAA AEQCEPAAVA SAVGLLQATG
FAVSRFLDVP GLIVMRTVAM LANEAADAVN QGVCSEAGAD QAMRLGVNYP QGPLAWADQV
GVAAIRDVLA NLGASYGEDR YRISPLIQRA VFAGRNIHD
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