| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0339 |
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| Symbol | secY |
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| ID | 3567085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 374907 |
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| End bp | 376229 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637678781 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_283568 |
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| Protein GI | 71905981 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.000142446 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000706243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | TTGGCTGCAA ATCCCAATAC CGTTGGCAAA GGTGGCAAGT TCGGCGATCT CAAGCGCCGG
CTTTGGTTCC TTTTGGGCGC ACTGGTTGTG TACCGCATTG GCGCCCATAT CCCGGTTCCG
GGGATTGACC CCAACGCTCT GGCCGATCTC TTCAATTCGC AGAAGGGTGG CATCCTGGGC
ATGTTCAACA TGTTCTCGGG TGGCGCCCTG TCGCGATTTA CGATTTTTGC GTTGGGGATC
ATGCCGTATA TTTCGGCGTC GATCATCATG CAGTTGATGA GTGTCGCTAG CCCGCAACTG
GAAGCTCTCA AGAAAGAGGG CGAGGCCGGG CGTCGGAAGA TCACTCAATA CACCCGCTAC
GGCACGGTGA TTCTTGCACT GTTTCAGGGG CTGGGTATTG CCGTCGCACT TGAAGCGCAG
GCCGGTCTGG TTAATGATCC AGGCTTTATG TTCCGCCTGA CAACCGTTTC CACGCTGCTG
ACCGGCACCA TGTTCCTGAT GTGGCTGGGT GAACAGATTA CCGAGCGTGG TCTTGGTAAT
GGTATTTCGA TCATTATTTT CGCTGGTATT GCCGCTGGCT TGCCGAACGC AATTGGCGGC
CTGCTTGAGC TGGTCCGTAC CGGAGCGATG CACCCCCTGA CGGCCCTGAT CATTTGTATT
CTCGTCGTTG CGGTTACTGG CTTCGTGGTC TTTGTCGAAC GTGGCCAACG GAAAATTCTG
GTCAATTACG CCAAGCGCCA AGTAGGTAAC AAGATTTATG GTGGACAGAG CTCGCACCTG
CCACTGAAGC TGAACATGTC TGGTGTAATC CCCCCGATTT TTGCTTCATC GATCATTTTG
TTCCCGGCAA CAGTGGCCAA CTGGTTTGGT TCCAGCGAGT CGATGCATTG GTTGAAGGAT
GTTGCGGGTA CCTTGTCTCC TGGGCAGCCG ATCTACGTGA TGCTGTACGC GTCAGCCATC
GTCTTTTTCT GCTTCTTCTA TACCGCCCTT GTGTTTAATT CCAAGGAAAC GGCCGATAAC
CTGAAAAAGA GTGGTGCTTT TGTCCCGGGT ATTCGTCCTG GTGAGCAAAC TGCCCGTTAT
ATTGACAAGA TCCTGATGCG CCTGACCCTG ATTGGGGCTG CTTACATCAC GGTTGTTTGT
TTGTTACCCG AATTTTTGAT CCTGAAGTGG AACGTTCCGT TCTATTTCGG TGGAACGTCG
CTGTTGATTA TCGTAGTCGT GACCATGGAC TTCATGTCCC AGGTTCAGGC CTATGTGATG
TCGCATCAAT ATGAAAGCCT GCTGAAGAAA GCAAACTTCA AGGGCGCACC TATGATCAAG
TAG
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| Protein sequence | MAANPNTVGK GGKFGDLKRR LWFLLGALVV YRIGAHIPVP GIDPNALADL FNSQKGGILG
MFNMFSGGAL SRFTIFALGI MPYISASIIM QLMSVASPQL EALKKEGEAG RRKITQYTRY
GTVILALFQG LGIAVALEAQ AGLVNDPGFM FRLTTVSTLL TGTMFLMWLG EQITERGLGN
GISIIIFAGI AAGLPNAIGG LLELVRTGAM HPLTALIICI LVVAVTGFVV FVERGQRKIL
VNYAKRQVGN KIYGGQSSHL PLKLNMSGVI PPIFASSIIL FPATVANWFG SSESMHWLKD
VAGTLSPGQP IYVMLYASAI VFFCFFYTAL VFNSKETADN LKKSGAFVPG IRPGEQTARY
IDKILMRLTL IGAAYITVVC LLPEFLILKW NVPFYFGGTS LLIIVVVTMD FMSQVQAYVM
SHQYESLLKK ANFKGAPMIK
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