| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0217 |
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| Symbol | |
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| ID | 3569609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 233636 |
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| End bp | 238270 |
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| Gene Length | 4635 bp |
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| Protein Length | 1544 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637678655 |
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| Product | glutamate synthase (NADH) large subunit |
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| Protein accession | YP_283446 |
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| Protein GI | 71905859 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCGG CAGTACCTGA GCGGCAGGGT TTGTACGACC CAGCCAACGA GCACGACGCT
TGCGGCGTGG GCTTTGTTGC CCACTTTAAA GGCCAGAAAA GTCATAGCAT CGTCGAGCAG
GGTTTGTTGA TCCTGAAGAA TCTGGATCAC CGCGGTGCCG TTGGTGCCGA TCCTTTGCAA
GGTGACGGTG CCGGTATTCT GATTCAGATT CCGGATCAGT TCTATCGCGA GGAGATGGCC
AAGCAGGGCG TTGAGCTGCC GCCAAATGGC GAATACGGTG TCGGCATGGT TTTCCTGCCG
CAGGAAGCCG CTTCGCGCCA CGCCTGCGTC GAAGAGATTG AGCGTTCCGT CAAGGCTGAG
GGGCAAGTCG TTCTCGGCTG GCGCGATGTG CCGGTCAACG CCGACATGCC AATGTCGCCG
ACCGTCAAGG CCAAGGAACC GGTGATTCGC CAGATCTTCG TTGGTCGTGG TCCGGACGTC
TTCGTGACCG ACGCGCTCGA ACGCAAGCTG TACATCATTC GCCGTCGTGC CGCCAACGCC
ATCAAATCGC TGAAGCTGAA GCATGGCCAG GAATTCTATG TGCCGTCTTT CTCGGCGCGC
ACGGTCAACT ACAAAGGTTT GCTGCTGGCC GACCAAGTCG GTGTGTACTA CGCCGACTTG
CAGGACAAGC GCACTGTTTC CGCGCTTGCG CTTGTGCACC AGCGATTCTC GACCAATACA
TTCCCGACTT GGGACTTGGC ACACCCGTTC CGCTATATCG CCCACAATGG CGAAATCAAT
ACGGTCCGCG GTAACGTCAA TTGGTTCAAG GCTCGTGAAC AGGCGATTTC CTCGCCGATT
CTCGGTGATG ACCTGAAGAA GGTCTGGCCG CTGCATTACC CAGGCCAGTC TGACTCTGCT
TCTTTCGACA ATGCGCTCGA ATTGCTGGTC ATGGGCGGCG GCTACTCGCT GGCCCAAGCC
GTCATGCTGA TGATTCCGGA AGCCTGGGAA AAGCACACGA CGATGGACGA AAACCGTCGT
GCCTTCTACG AATATCACGC TGCGATGATG GAGCCGTGGG ACGGCCCCGC CGCCGTGGCC
TTCACCGATG GCCGTCAGAT TGGCGCGACG CTGGATCGTA ACGGTCTGCG TCCGGCCCGC
TACCTGGTGA CCGACGATGA CCTCGTCGTC ATGGCTTCCG AATCCGGCGT GCTGCCGATT
CCGGAAAAGA AGATTGTCAA GAAGTGGCGC CTGCAACCGG GCAAGATGTT CCTGATCGAC
ATGGAGCAGG GCCGCATCAT CGATGACCAG GAGTTGAAGA ACTCGCTGGC CAACGCCAAG
CCTTACCGCG AGTGGATCGA AAAGATTCGC ATCAAGCTCG ACGAAGTGCC GGCCGCTGCC
GAAAAGTGTG CCGAGTCCGC TGCTTCCCTG CTCGATCGTC AGCAAGCCTT TGGTTACACG
CAGGAAGACG TCAAGGTCAT TCTTGAGCCG ATGGTGCAGA ACGGCGAAGA GGCGACTGGT
TCGATGGGTA CCGATTCGGC TTTGCCGGTC CTGTCCAGCA AGAACAAGAC GCTCTACACC
TATTTCAAGC AGTTGTTTGC CCAGGTGACC AACCCGCCGA TCGATCCGAT CCGCGAAGAG
CTGGTCATGT CCCTGGTGTC CTTCATCGGT CCGAAGCCGA ACCTGCTGAA TACCAACGAC
ATCAACCCGC CGATCCGTCT TGAAGTGTCG CAACCGGTCC TGTCCTTCGC CGACATGGAA
AAGCTGCGCA ACATCGAGAA GTACACGTCC GGCAAGTTCC GCTCTCTCGA ACTGGATATC
TGCTACCCGG TCGCCTGGGG CAAGGACGGC ATTGAAGCGC GTCTGGCTTC GCTGGCGGCG
GATGCCGAGG ATGCTGTTCG CTCTGGTGCC AATATCCTGA TCGTCTCCGA TCGCAAGGTT
GATGCCGGGC ATGTCGCCAT TCCGGCGCTG CTCGCGACTT CCGCGATTCA TCAGCATCTG
GTCAAGAAGG GCCTGCGCAC CAGCGCCGGT TTGGTTGTCG AGACCGGTTC GGCCCGCGAG
ACGCATCACT TTGCCTTGCT GGGTGGTTAC GGCGCCGAAG CGGTTCACCC GTATCTGGCC
CTCGAAACCA TCGAAAGTTT CGCCAAGGGC GATGCCGAGA AAGCCGAGAA GTTCACCAAG
AACTTCATCA AGGCAATTGG CAAGGGCCTG AACAAGGTCA TGTCCAAGAT GGGCATTTCG
ACCTACATGT CCTATACCGG TGCCCAGATT TTCGAAGCAA TCGGTCTGCA GAAGGCATTT
GTCGAAAAGT ACTTCACCGG GACGCCGTCC AATATCGAAG GTATTGGGGT TTTCGAGGTG
GCTGAAGAGT CCATTCGTCT GCACGACGAA GCGTTTTCCT CGGACCCCGT GCTGGCCAAC
ATGCTGGACG CCGGTGGCGA ATACGCTTAC CGTATCCGTG GTGAAGAGCA CGTGTGGACC
CCGGACTCCA TCGCCAAGCT GCAGCATTCG ACCCGCTCCG GCAAGTACGA GACGTACAAG
GAGTACGCCA AGCTGATCAA CGATCAGACC AAGCGTCATC TGACCTTGCG CGGCCTGTTC
GAATTCAAGC CGCAAGGCAC GGCAATTCCG CTGGAAGAAG TCGAGCCGGC CAAGGAAATC
GTCAAGCGTT TTGCCACGGG CGCCATGTCG CTCGGTTCGA TCTCGACCGA AGCGCACACC
ACGCTGGCAA TTGCCATGAA CCGGATCGGC GGCAAGTCGA ATACCGGCGA AGGTGGCGAG
GATGCCAAGC GTTTCCTGCC GCTGAAAGCC GGTCAGAAAC TGTCCGAAGT CATCGGTGCC
TCGCGTATCG AGCGCGACTA TGAATTCAAG GACGGTGATT CACTGCGTTC GGCGATCAAG
CAGGTGGCCT CCGGTCGTTT CGGCGTTACT GCCGAGTATC TGGTCAATGC TGACCAGATC
CAGATCAAGA TGGCCCAGGG CGCCAAGCCA GGTGAAGGTG GTCAGCTGCC AGGTCACAAG
GTGTCCGAGT ACATTGGCTT CCTGCGTCAC TCCGTACCGG GCGTCGGCCT GATTTCACCG
CCACCGCACC ACGACATCTA CTCGATTGAG GATCTGGCAC AGCTGATTCA CGACCTGAAG
AACGCCAACT CGCGTGCTTC GATCTCCGTC AAGCTGGTTT CCGAAGTCGG AGTTGGTACC
GTGGCTGCCG GTGTGGCCAA GGCCAAGGCT GACCACGTCG TGATCGCCGG TTTCGACGGC
GGCACGGGTG CTTCGCCGCA ATCTTCGATC AAGCATGCCG GTACGCCGTG GGAACTCGGC
CTGTCCGAGA CGCAGCAGAC GTTGGTGCTG AACCGTCTGC GTTCGCGCAT TCGTGTTCAG
GTCGATGGTC AGATGAAGAC CGGTCGCGAC GTCGTCGTCG GTGCGCTGCT TGGCGCCGAC
GAGTTCGGCT TCGCCACCGC ACCGCTGGTG GTCGAAGGCT GCATCATGAT GCGCAAGTGC
CATCTGAATA CCTGCCCGGT TGGCGTCGCC ACCCAGGATC CGGTGCTCCG TCAGCGCTTC
TCCGGCCAGC CGGAGCACGT GGTCAACTTC TTCTTCTTCG TCGCCGAAGA AGTACGGGAA
ATCATGGCTC AGCTGGGTAT CCGCAAGTTT GACGATCTGG TCGGTCGTGC CGATCTGCTC
GACACCCGCG CCGGTATCGA GCACTGGAAG GCCAAGGGCC TGGACTTCTC CAAAGTGTTC
TATCAGCCGA GCGTTCCGGC CGAAGTTTCG CGCCGTCATA CCGAGACTCA GGATCACGGT
CTGGAAAAGG CGCTTGATCA CAAGTTGATC GAGCAGGCCA AGCCGGCCCT CGAAAAGGGC
CAGAAGGTCC AGATCGAGAC CAAGATCATC AACGTGAACC GCACCTGCGG CACCATGCTG
TCAGGTGAGG TTGCCCGCCG CTATGGCAAT GACGGCCTGC CGGACGACAC CATTCACGTC
AAGCTGACCG GTACTGCCGG CCAGGCCTTC GGTGCTTTCC TGGCCAAGGG CGTGACGCTG
GAATTGACCG GCGAAGGCAA TGACTACGTT GGCAAGGGCT TGTCGGGCGG TCGTCTGATC
ATCAAGCCGA GCCCCGATTT CCGTGGCGAT ACGCAGCAGA ACATCATTTG CGGCAATACC
GTCATGTACG GTGCAACCGA TGGCGAAGCC TACCTGGCTG GCGTCGGTGG CGAGCGCTTC
TGCGTCCGCA ACTCCGGTGC CACGGCGGTT GTCGAAGGCG TCGGCGACCA TGGCTGCGAA
TACATGACCG GCGGTACGGT CGCGGTGCTG GGTATGACCG GACGCAACTT TGCGGCCGGT
ATGTCGGGCG GCATTGCCTA CGTGCTGGAC GAGGATGGCA GCTTCAAGAA CCGTTGCAAC
CTGGCTCAGG TGGCTCTGGA GAAAGTGTTG CCAGCAACGC GTCAAGCGGC CAGTGAGCCG
CTGCACCGTG GTATCGCCGA CGAAACGCAA CTCAAGGAAC TGGTGACTCG TCACGCCGAA
TTTACCGGCA GCGCGACCGC CAAGGCCATC CTGGCCAACT GGGATGCCTG CCGCGAGAAG
TTTGTCAAAG TCTATCCGCA CGAGTACAAG CGCGCCCTCA CCGAGATGGC TGCTGCACAG
AAGGAGGCCG CATAA
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| Protein sequence | MEPAVPERQG LYDPANEHDA CGVGFVAHFK GQKSHSIVEQ GLLILKNLDH RGAVGADPLQ
GDGAGILIQI PDQFYREEMA KQGVELPPNG EYGVGMVFLP QEAASRHACV EEIERSVKAE
GQVVLGWRDV PVNADMPMSP TVKAKEPVIR QIFVGRGPDV FVTDALERKL YIIRRRAANA
IKSLKLKHGQ EFYVPSFSAR TVNYKGLLLA DQVGVYYADL QDKRTVSALA LVHQRFSTNT
FPTWDLAHPF RYIAHNGEIN TVRGNVNWFK AREQAISSPI LGDDLKKVWP LHYPGQSDSA
SFDNALELLV MGGGYSLAQA VMLMIPEAWE KHTTMDENRR AFYEYHAAMM EPWDGPAAVA
FTDGRQIGAT LDRNGLRPAR YLVTDDDLVV MASESGVLPI PEKKIVKKWR LQPGKMFLID
MEQGRIIDDQ ELKNSLANAK PYREWIEKIR IKLDEVPAAA EKCAESAASL LDRQQAFGYT
QEDVKVILEP MVQNGEEATG SMGTDSALPV LSSKNKTLYT YFKQLFAQVT NPPIDPIREE
LVMSLVSFIG PKPNLLNTND INPPIRLEVS QPVLSFADME KLRNIEKYTS GKFRSLELDI
CYPVAWGKDG IEARLASLAA DAEDAVRSGA NILIVSDRKV DAGHVAIPAL LATSAIHQHL
VKKGLRTSAG LVVETGSARE THHFALLGGY GAEAVHPYLA LETIESFAKG DAEKAEKFTK
NFIKAIGKGL NKVMSKMGIS TYMSYTGAQI FEAIGLQKAF VEKYFTGTPS NIEGIGVFEV
AEESIRLHDE AFSSDPVLAN MLDAGGEYAY RIRGEEHVWT PDSIAKLQHS TRSGKYETYK
EYAKLINDQT KRHLTLRGLF EFKPQGTAIP LEEVEPAKEI VKRFATGAMS LGSISTEAHT
TLAIAMNRIG GKSNTGEGGE DAKRFLPLKA GQKLSEVIGA SRIERDYEFK DGDSLRSAIK
QVASGRFGVT AEYLVNADQI QIKMAQGAKP GEGGQLPGHK VSEYIGFLRH SVPGVGLISP
PPHHDIYSIE DLAQLIHDLK NANSRASISV KLVSEVGVGT VAAGVAKAKA DHVVIAGFDG
GTGASPQSSI KHAGTPWELG LSETQQTLVL NRLRSRIRVQ VDGQMKTGRD VVVGALLGAD
EFGFATAPLV VEGCIMMRKC HLNTCPVGVA TQDPVLRQRF SGQPEHVVNF FFFVAEEVRE
IMAQLGIRKF DDLVGRADLL DTRAGIEHWK AKGLDFSKVF YQPSVPAEVS RRHTETQDHG
LEKALDHKLI EQAKPALEKG QKVQIETKII NVNRTCGTML SGEVARRYGN DGLPDDTIHV
KLTGTAGQAF GAFLAKGVTL ELTGEGNDYV GKGLSGGRLI IKPSPDFRGD TQQNIICGNT
VMYGATDGEA YLAGVGGERF CVRNSGATAV VEGVGDHGCE YMTGGTVAVL GMTGRNFAAG
MSGGIAYVLD EDGSFKNRCN LAQVALEKVL PATRQAASEP LHRGIADETQ LKELVTRHAE
FTGSATAKAI LANWDACREK FVKVYPHEYK RALTEMAAAQ KEAA
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