| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0028 |
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| Symbol | |
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| ID | 3567790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 31839 |
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| End bp | 33098 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637678457 |
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| Product | Fmu, rRNA SAM-dependent methyltransferase |
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| Protein accession | YP_283257 |
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| Protein GI | 71905670 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 74 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.577432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGAT TGCCCTTCAA TTCACTCGCT TTTGCCCTGC TGCAGGCCGC TCGCATCGAT
GCAGCCGTCT TTGCCGGGCA GAGCCTGGCC GACGGCCTTC TTGCTCGAGT CGATCCAGCC
GCCCGCCCTG CCGTCCAGGA TCTTGTCTAT GGCAGTCTGC GGGCTTACGG GCGGGGTGAC
TTTTTCCTTG GTCGCCTGCT CGACAAGCCG CTGGATGTCG AAGAAGTCCG CGCCCTGTTG
CTGGTCTCGA TTTATCGACT GGAAACCCGC CCGGATGCAG CACACACCGT GGTCGATCAG
GCGGTTTCGG CCGCCGGCGA ATTGGCGAAC GGGCGTTTTC GTGGGTTGGT CAATGCCGTG
CTGCGCAATT TTCTGCGCCA GCAAGAGGCC CTGGTTGCCG CACTGGCGGA CGATGCGGTC
GCCGTATCCC AGCACCCGGA CTGGTGGCTG GCACAGTTGC AGGCCGCCTA TCCGGATGAC
TGGCAGCGCA TCGTTGCAGC CGGGAATGCC CCGCCGCCGA TGGGGCTGCG GGTCAACGTC
CGCCGCGCCT CGCGTGATGA TTATCTGGCG CGATTGACCG ACGCCGGGAT AAGCGCCACA
GCGGTTGGTG AATCCGGCCT GGCGTTGGCC AAGCCGGTGC CGGTCGAATC CCTGCTTGGT
TTTGCCGCCG GGCTGCTGTC CGTGCAGGAC CCGGGCGCCC AAATGGCGGC GTCACTGCTC
GATCCGGAAC CGGGTAGCAG GGTGCTCGAC GCCTGTGCCG CGCCTGGTGG CAAGACGGCG
CATCTGCTGG AACGCAGCGA TCTCGATTTG CTGGCGCTGG ACTTGAAGCC TTCCCGCTGC
CGCCGAATCG AGGAAAATTT GTCTCGACTC GGGCTGACCG CCAGCGTCAA GGCGGCTGAT
TGCGTCAAGC TGGACACCTG GTGGGATGGC CGGCCGTTCG ATGCGGTGCT GGCCGATGTG
CCCTGCACCG CCAGCGGCGT CGTCCGCCGT AATCCTGATA CCAAGTGGTT GCGCCGTGAG
GCCGATATCT TCAGTTTTGC CAAGACCCAG GCCCGCATAC TCGACGCCTT GTGGCAGGTC
GTTCGCCCCG GGGGTAAACT GCTTTACGTG ACCTGTTCGG TTTTTCCGAC CGAAAACGGT
GTGCAGATTG CGCGCTTTCT GGAGCGCCAG CCGGAGGCCC GCCGCTGTCA CGAAGAACAG
CTTTTGCCAA CAGCCGACCA CGATGGCTTT TACTACTGCC TACTTGAAAA GCATGCTTAA
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| Protein sequence | MSRLPFNSLA FALLQAARID AAVFAGQSLA DGLLARVDPA ARPAVQDLVY GSLRAYGRGD
FFLGRLLDKP LDVEEVRALL LVSIYRLETR PDAAHTVVDQ AVSAAGELAN GRFRGLVNAV
LRNFLRQQEA LVAALADDAV AVSQHPDWWL AQLQAAYPDD WQRIVAAGNA PPPMGLRVNV
RRASRDDYLA RLTDAGISAT AVGESGLALA KPVPVESLLG FAAGLLSVQD PGAQMAASLL
DPEPGSRVLD ACAAPGGKTA HLLERSDLDL LALDLKPSRC RRIEENLSRL GLTASVKAAD
CVKLDTWWDG RPFDAVLADV PCTASGVVRR NPDTKWLRRE ADIFSFAKTQ ARILDALWQV
VRPGGKLLYV TCSVFPTENG VQIARFLERQ PEARRCHEEQ LLPTADHDGF YYCLLEKHA
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