| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_6026 |
|---|
| Symbol | |
|---|
| ID | 5751657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6733702 |
|---|
| End bp | 6734481 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641301168 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001567039 |
|---|
| Protein GI | 160901457 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CAGCATCTCC CATCCTGCTC GAAGCCGTGG GCGTCGAGAA ACGCTATGAC
AAGTTCGTCG CCCTGGGCGG CGTGGACCTC AAGGTCCGCG CCCACACCGT GCACTCGGTG
ATCGGCCCCA ACGGCGCGGG CAAGACCACG CTGTTCCACA TGCTCACGGG CACCAAGAGC
GTGAGCGGCG GGCGCATCGT GTTCGACGGC CACGACGTGA CGCGCGAGCC CGACCACCGC
CGCGTGCGCC GTGGCATGGC ACGGTCCTTT CAGGTCACCA GCCTGTTCCT GACCCTGCCC
GTGCGCGAGA ACCTGCGCCT GGCCGCGCAG GGCGTGGCGC CCGCCAGGGC CCTGGACTGC
TGGAACGCGC CCGTGGGTGC TCGCGCCCTG GCCGATACCG TGGCCAGCGT GCTGTCGCGC
CTGGGCCTGG AGCGCCATGC GGACACGCCG GCCGGCAACC TCTCGCACGG CCAGCAGCGG
CGGCTGGAGG TGGGCATGGC CCTGGCCGCA CGGCCCAAGG CCATCTTCCT GGACGAGCCG
ACCTCGGGCA TGGGCATCGA CGACCTGGAC GAGATGAAGC GCCTGATCCA GGGCCTCAGG
GACGAGCACA CCGTGGTCCT CATCGAGCAC AACATGAACA TCGTCATGGA CATCTCCGAC
ACCATCACCG TCATGCAGCA AGGCCGCGTG CTGGCCGAAG GACTGCCCCA CGAGATCCGC
GCCGACGAGC GCGTGCGCAG CGCCTATCTG GGCAACATGA TCACGGGAGG AAAGGCATGA
|
|---|
| Protein sequence | MSAAASPILL EAVGVEKRYD KFVALGGVDL KVRAHTVHSV IGPNGAGKTT LFHMLTGTKS
VSGGRIVFDG HDVTREPDHR RVRRGMARSF QVTSLFLTLP VRENLRLAAQ GVAPARALDC
WNAPVGARAL ADTVASVLSR LGLERHADTP AGNLSHGQQR RLEVGMALAA RPKAIFLDEP
TSGMGIDDLD EMKRLIQGLR DEHTVVLIEH NMNIVMDISD TITVMQQGRV LAEGLPHEIR
ADERVRSAYL GNMITGGKA
|
|---|
| |