Gene Daci_6010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6010 
Symbol 
ID5751641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6714743 
End bp6716344 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content70% 
IMG OID641301152 
Producthypothetical protein 
Protein accessionYP_001567023 
Protein GI160901441 
COG category[S] Function unknown 
COG ID[COG5267] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCTA CCCACCGAGA CACCATGCGC CGCACATCGC CGTTCGCCAT CGCTCTCACG 
TTCTGCGCCA TCACCCTGGC CACGGGCTGC GCGCCCCTGC AGGCGCCGCC CTCCTCCGCA
ACGCCCGCAA TCCAGGCCCT GCCCGATGCC CCCCTCACCG CCGCGCAGCG CCAGCAATGG
CTGGACCGCG TGACCTGGGG CGCCACCGAC AGCGAGGATG CACAGCTGCA GCGCCTGGGC
TTGAAGGCCT GGCTGGCCCG GCAGTTGCAG CCCGGCCCCC GGCCGCTGCC GCCGCAGGCA
CAGCAGCGGA TTGACCAGCT GGGCATCAGC CAGCGCCCCA TGAACGAGGT GCTGCTGGAA
CTGGAGACCC AGCGCAAGGC CGTGCAGGAG GCGGCATCGG CCGATGAAAA GGCCACGCTG
CAGCAGACCT ACCAGCGCAC GCTGAACCAG TTGGGCAACG ATGCCCAGAA GCGCTTCGTG
ATCCGCGCGC TGTACTCGCC GGCACAGCTG CAGGAGCAAA TGACCTGGTT CTGGATGAAC
CATTTCAGCG TCAGCCTGCG CAAGGCCGAT ATCCGCGCCT GGGTGGGCGA CTACGAGGAG
CAGGCCATAC GCCCGCATGC GCTGGGCAGC TTTCGCAGCC TGCTGGAAGC CTCGCTGCGC
CACCCGGCCA TGCTGCGCTA CCTGGACAAC GCCAGCAATG CGGCAGGCCG CATCAACGAG
AACTACGCGC GCGAACTGCT GGAGCTTCAC ACCATGGGCG TGGGCAGCGG CTACACCCAG
GCCGATGTGC AGGAGATGGC GCGCATCCTG ACCGGCGTGG GCATCAGCCT GCAGCCGGCC
GGCACGCCGC CGCCGCGCAT GCGCCCCGAG CGCCAGGGCG ACTACCTGCG CTCGGGCTTT
TTCGAGTTCA ACCCCAACCG GCACGACTAC GGCCCCAAGT CCTTCCTGGG CCAGCCCATG
CACGCACGCG GCATGGCCGA GGTCCAGGAG GCGCTGGACC GCATCGTCGC CTCGCCGGCC
ACGGCGCAGT TCATCGCGCG CAAGCTGGCG GTGTTCTTCA TTGCCGACGA TCCGCCGCCC
GCCCTGGTGC AGCGCACGGC CCAGGCCTTC ACGCGCAGCC GGGGCGATAT CGCGGCCACC
GTGGCGGCGC TGCTGACCGA TCCGGAGGCC GCCCGCTTCG GCCGCAAGTT CCGCGATCCG
CTGCACTACG TGCTGGCCGC CACGCGGCTG TCGGTGGACC AGCGCGTGGC GGCCGACGTG
GCGCCGGTGC TGGGCTGGGT CAACCGGCTG GGGCAGAACC TCTATGCGCA CGAGACGCCG
GACGGCTATC CGCAGATGCA GTCCGACTGG GCCAGCTCGG GCCAGATGGC GGCGCGCTTC
GAGGTGGCGC GCCAGATCGC CACGCGCAGC GCCGTGCTGT TCCGCGCCGA CCCCGCAGAC
GCGCTGGAGA AGCCGCCCTA CCCCACGCTG TCGGAATTGG CCAGCGTGCG CCAGCGCCTG
CCGCAGTGGA GCCAGGCCAC GCAGGCGGCA CTGGCCCAGG CCCGCAATCC GGCGGACTGG
AATACCTACT TCCTGTCCGC CCCCGAAATG ATGTTCCGCT GA
 
Protein sequence
MPPTHRDTMR RTSPFAIALT FCAITLATGC APLQAPPSSA TPAIQALPDA PLTAAQRQQW 
LDRVTWGATD SEDAQLQRLG LKAWLARQLQ PGPRPLPPQA QQRIDQLGIS QRPMNEVLLE
LETQRKAVQE AASADEKATL QQTYQRTLNQ LGNDAQKRFV IRALYSPAQL QEQMTWFWMN
HFSVSLRKAD IRAWVGDYEE QAIRPHALGS FRSLLEASLR HPAMLRYLDN ASNAAGRINE
NYARELLELH TMGVGSGYTQ ADVQEMARIL TGVGISLQPA GTPPPRMRPE RQGDYLRSGF
FEFNPNRHDY GPKSFLGQPM HARGMAEVQE ALDRIVASPA TAQFIARKLA VFFIADDPPP
ALVQRTAQAF TRSRGDIAAT VAALLTDPEA ARFGRKFRDP LHYVLAATRL SVDQRVAADV
APVLGWVNRL GQNLYAHETP DGYPQMQSDW ASSGQMAARF EVARQIATRS AVLFRADPAD
ALEKPPYPTL SELASVRQRL PQWSQATQAA LAQARNPADW NTYFLSAPEM MFR