Gene Daci_5996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5996 
Symbol 
ID5751627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6697130 
End bp6699013 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content65% 
IMG OID641301138 
ProductK potassium transporter 
Protein accessionYP_001567009 
Protein GI160901427 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.106648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00272836 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCATA GACCTGTGCA GAAAACCAAA TCTTCGTTGG CCGCGCTCAC CCTGGGCGCC 
ATCGGCGTGG TCTATGGCGA TATCGGCACC AGCGTGCTGT ACTCGGTCAA GGAGGTGTTC
GGCTCCGGCC ATGTGCCGTT CACCCAGGAG AACGTCTACG GCGTCCTGTC GCTGCTGTTC
TGGACGCTGA CGGTCATCGT CTCGCTCAAA TACGTGGTCC TGGTGCTGCG CGCCGACAAC
AACGGCGAAG GCGGCCTGGT CGCCATGCTG GCCCTGGCCT CGCAGACCGT CAAGGACAAG
CCGCGCCTGC GCAGCGTGCT GCTGCTCATC GGCATCTTCG GCACCTCGCT GTTCTATGGC
GACGGCGTGA TCACGCCGGC CATCTCCGTG CTTTCGGCCG TCGAGGGCCT GGAGGTGGTG
TCCCCGCACT TCACCAAGGC CGTGATCCCG CTGACCCTGG TCATCCTGTT CCTGCTGTTC
TGGTTCCAGA AACACGGCAC GGCAGGGATA GGGCGTTTCT TCGGCCCCAT CACCCTGGTC
TGGTTCGCCA CCATCGCCGC ACTGGGCATA CACCAGATCG CCGGCCATCC GGAAATCCTG
GCGGCCATCA GCCCGCACTT CGCGGTGCGC TTCATCTGGG ACAACCCCGG CACCAGCTTC
ATCATTCTGG GCGCCGTCGT GCTGTGCGTG ACCGGGGCGG AAGCGCTCTA CGCCGACCTG
GGCCACTTCG GCAAGAAGCC CATTCGCCTG GCCTGGTTCT CCGTGGCCAT GCCTGCCCTC
ACGCTCAATT ACTTCGGCCA GGGTGCGCTG CTGCTGGCCA ACCCGGCCGC CGTGAAGAAT
CCCTTCTACA TGATGGCCCC GGCCTGGGCC CTGCTGCCCC TGGTGCTGAT GGCCACCATG
GCCACGGTCA TCGCTTCGCA GGCCCTGATC ACGGGCGCCT TCAGCGTCAC GCGCCAGGTC
ATACAGCTGG GCTATCTGCC GCGCCTGGAA GTGCGCCACA CCAGCGTGCG CGAGGCCGGC
CAGATCTACA TGCCCCTGGT CAACTGGAGC CTGTTCGTTG CCATCGCGCT GGCCGTGGTG
CTGTTCCGCT CCAGCGGCAA CCTGGCGGCC GCCTACGGCA TTGCGGTGAC GCTGGACATG
CTGATCACCA CCACCCTGAC CTTCTTCGTG ATCCGCTACC GCTGGAACTA CCCGCTGGCC
CTGTGCATTG CCGCCACCGG CTTCTTCTTC CTGGTGGACC TGGCCTTCTT CTCGTCCAAC
CTGCTCAAGC TGTTCGATGG CGGCTGGTTC CCGCTGCTGA TCGGCGGCAC GGTGTTCTCG
CTGATGATGA CCTGGCGCAA GGGCCGCGAG CTGCTGCACC AAAAGCTGCA GGCCGATGCC
ATCGACCTCA AGAGCTTCCT CGAATCGGTC TGGCGCCATC CCCCGGCGCG GGTGCCGGGC
ACGGCCGTCT TCCTGTCCGG CGAGCCTGGC ACCGTGCCCA ACGCCCTGCT GCACAACCTC
AAGCACAACA AGGTGCTGCA CAGCCAGAAC ATCTTCGTCA CGGTGCGCAA CCACGAAATT
CCCTGGGTGG GCCTGGACAA GCGTACCGAG ATCGAGGCCC TGGGCAGCGA CTGCTGGCAG
GTCATCATCA ACTACGGTTT CAAGAACGAA CCCGACGTGC CGGCGGCGCT GTCCCTGTTG
CGTCCCCGGG GCTGCCAGCT CGACGCCATG GAGACCAGCT ACTTCCTGTC GCGCGATGTC
ATCATCCCGC GCATCAGCCA CCGCATGGCG CCCTGGCGCG AAAAGCTGTT CGCCCAGATG
CACCGCAACG CCAGCCGTGT CTCCGACTTC CTGCACCTGC CCAGCAACTC CGTGGTGGAG
CTGGGCTCCA AGATCGAGCT GTAG
 
Protein sequence
MAHRPVQKTK SSLAALTLGA IGVVYGDIGT SVLYSVKEVF GSGHVPFTQE NVYGVLSLLF 
WTLTVIVSLK YVVLVLRADN NGEGGLVAML ALASQTVKDK PRLRSVLLLI GIFGTSLFYG
DGVITPAISV LSAVEGLEVV SPHFTKAVIP LTLVILFLLF WFQKHGTAGI GRFFGPITLV
WFATIAALGI HQIAGHPEIL AAISPHFAVR FIWDNPGTSF IILGAVVLCV TGAEALYADL
GHFGKKPIRL AWFSVAMPAL TLNYFGQGAL LLANPAAVKN PFYMMAPAWA LLPLVLMATM
ATVIASQALI TGAFSVTRQV IQLGYLPRLE VRHTSVREAG QIYMPLVNWS LFVAIALAVV
LFRSSGNLAA AYGIAVTLDM LITTTLTFFV IRYRWNYPLA LCIAATGFFF LVDLAFFSSN
LLKLFDGGWF PLLIGGTVFS LMMTWRKGRE LLHQKLQADA IDLKSFLESV WRHPPARVPG
TAVFLSGEPG TVPNALLHNL KHNKVLHSQN IFVTVRNHEI PWVGLDKRTE IEALGSDCWQ
VIINYGFKNE PDVPAALSLL RPRGCQLDAM ETSYFLSRDV IIPRISHRMA PWREKLFAQM
HRNASRVSDF LHLPSNSVVE LGSKIEL