| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5968 |
|---|
| Symbol | |
|---|
| ID | 5751589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6655162 |
|---|
| End bp | 6656196 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641301100 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001566981 |
|---|
| Protein GI | 160901399 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGC CCACCCACGG CACGCGGCGT GACGCCATCG CCAAAATCAA GGCAGCCACC
GCATTCACGG CGATTCCCCT GGCCTTCATG GCCCTGGGCC TGGCGGGCCA GGCCTCGGCC
CAGACCCCGT CGCCGGCGTT CCCCAGCAAG ACCATCCGCT TCGTCGTGCC CTACCCGCCC
GGCGGCCCCA CCGACCTGAT GGCACGCATG CTGCAGCCCG AGCTGCAGCA GCGCCTGGGC
GTGACCGTCA TCGTGGAGAA CAAGAGCGGC GCGGGCGGCA ACCTGGGCAG CGCCGAGGTG
GCCCGCCAGG CGCCGGCCGA CGGCCACACC CTGCTGCTGG CCGCCAGCGG CCCCATGGCC
GTGAATTCCT CGCTGTACAA GAGCATGCCC TTCAACCCGC TCAAGGACCT GGAGCCCGTG
GTGCAGCTGT CGGCCTTCCC GCTGGTGCTG GAAGTGCATC CCTCACTGGG CGTGAAGACC
GTGGCCGAGC TGCTGGCCCT GGCCAAAACG GGCAAGACGC TGAGCTTTGC CTCGGCCGGC
AATGGCACGC CCCAGCACCT GGCGGGCGAG CTGTTCAACT CCATGGAGCA GGTCAAGCTG
GGCCATGTGC CCTACCGGGG TGCGGGACCG GCACTCAACG ACCTGATCGG CGGCCAAGTG
GGCGTGATGT TCGACATCGT GGGCAGCTCG CTGCAGCACA TCCAGGGCGG GCGCCTGATC
CCGCTGGCCG TCACCTCGGC CGAGCGCACC AAGGTGCTGC CCGACGTGCC CACCATGGCC
CAGGCCGGCG TGCCCGGCTA CCAGATCACG GGCTGGCATG GCATTGCCGT GCGCGCGGGC
ACGCCGCCCG CCGCCATCGA CAAACTCAAT GCCACGGTCA ACGCCATCTT CAAGGACCCG
GCCTTTCGCA CGCGCTGGGA GGCCATAGGC ACGCCGGCCG TGGGCGGCAC GGCGGCCGAA
TTCGGTGCCT TGATCAAGAG CGACTCCCAG CGCCTGGGCG CGCTGGTGCG CAGCACCGGC
GTGACGCTGG ACTGA
|
|---|
| Protein sequence | MQQPTHGTRR DAIAKIKAAT AFTAIPLAFM ALGLAGQASA QTPSPAFPSK TIRFVVPYPP
GGPTDLMARM LQPELQQRLG VTVIVENKSG AGGNLGSAEV ARQAPADGHT LLLAASGPMA
VNSSLYKSMP FNPLKDLEPV VQLSAFPLVL EVHPSLGVKT VAELLALAKT GKTLSFASAG
NGTPQHLAGE LFNSMEQVKL GHVPYRGAGP ALNDLIGGQV GVMFDIVGSS LQHIQGGRLI
PLAVTSAERT KVLPDVPTMA QAGVPGYQIT GWHGIAVRAG TPPAAIDKLN ATVNAIFKDP
AFRTRWEAIG TPAVGGTAAE FGALIKSDSQ RLGALVRSTG VTLD
|
|---|
| |