| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5958 |
|---|
| Symbol | |
|---|
| ID | 5751579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6646621 |
|---|
| End bp | 6647256 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641301090 |
|---|
| Product | PEBP family protein |
|---|
| Protein accession | YP_001566971 |
|---|
| Protein GI | 160901389 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1881] Phospholipid-binding protein |
|---|
| TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCA TCAGCCAAAG CTTCCAGGAC GGCCAGGCGA TTCCCGGCGA ATTCGCGTTC
GCGGTGCCCG ATGCGGCCTC GCACGTGGCG CTGTCGTCCA ACCGCAACCC GCACCTGGCC
TGGAGCGGCG CGCCCGCAGG CACGCAGTCC TTCGTCGTGG TCTGCCATGA TCCCGACGTG
CCCAGCCGCG GCGACGATGT GAACCAGGAA GGCCGCGAAG TGCCGGCCAG CCTGCCGCGC
GTGGACTTCT TCCACTGGCT GCTGCTGGAC ATTCCGGCCG CCACCACCGA GATCGCGGCA
GGCGCCCAGT CCGACGGCGT CACGCCGCGC GGCAAGAGCG GCCCGGCAGC CCCCGGCGGC
CTGCGCCACG GCATCAACGA CTACACGGGC TGGTTCGCGG GCGACGAGCA GATGAAGGGC
GACTACTTCG GCTACGACGG CCCCTGCCCT CCGTGGAACG ACAGCATCGT CCACCACTAC
GTCTTCACCG TCTATGCGCT GGCCACGCCC ACGCTGGCCG TCTCCGGCGA GCTGACCGGC
GCCAATGTGC GCGCGGCGCT GCAAGCCGGC CAGGTGCTGG GCAAGGCCAG CATCACCGGC
CTGTACAGCC TGAACCCTGC GGTCTCCGCC GCCTGA
|
|---|
| Protein sequence | MQLISQSFQD GQAIPGEFAF AVPDAASHVA LSSNRNPHLA WSGAPAGTQS FVVVCHDPDV
PSRGDDVNQE GREVPASLPR VDFFHWLLLD IPAATTEIAA GAQSDGVTPR GKSGPAAPGG
LRHGINDYTG WFAGDEQMKG DYFGYDGPCP PWNDSIVHHY VFTVYALATP TLAVSGELTG
ANVRAALQAG QVLGKASITG LYSLNPAVSA A
|
|---|
| |