Gene Daci_5931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5931 
Symbol 
ID5751552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6602547 
End bp6604421 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content62% 
IMG OID641301063 
Producthypothetical protein 
Protein accessionYP_001566944 
Protein GI160901362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACC TGCCTCGCAC CGTCCACCTT CCATATGCAT CCACGCTGAT CGCCGCAGGC 
CTTGCCCTGG CATCCATGGC AACCCATGCA CAGACAGGTT CTGGTGCCAC GCGCGGCCAG
CCCCTGGTCA TCGCGCCCAC GGTGGAAGGC ATGCTCCTGT GCGATGAAGC CGTTGCAGAA
ACCAGGATCA AGTCCATGGA CGAGGCCTAT GCCTTCTGCC AGCAGCGCAA GCTGGACGGC
TCCGCTGCCG TCAACCGCCT GCTGGACACG CTGGAGCCAG GCGGCCCCAA GGGCAACGTG
CAGATCGGCT ACACCGCCAC GCTGCAATTG CTGGGGCTGT ACCAGCGCAC GGCCAAGGGC
TGGGAAATCG ACGAAGCCAA GGTGGACAGC TTCCTGAACG TCATCCGCAA GGTGCAGCGT
CCGGTCGTGC TGTATTTCTC GGCAGACCAT TTCGACTCCG TCGGCCCCAT TGCCGCCGAG
CTGGCCAAGG ACCCCGTCAA CCTGATGCAG CTGCGCGACG GCAAGCCTCT GGAATTGGGT
TATTTCGGCT ACCGCATCCT GCCCTACACG CTCTCGACGG ATGCTTCGGT TCCCGTCAAT
CACTACCGCT TCAAGGCACT TGAATACATG GCCAGGAAGA TCCGGGAGCT GCCCAAGCCT
GTACAGGACC GCATCATTGC CTACACGTTG CCGGGCGAGC TGCACCACAT GTTCCCGGAC
TTCGAGAACG GCATGGGTGC CTATCAGGAC ATCCGTGTCA CTGACTACAG CCCGGGCTCG
GTCGCAGGCT TTCGCCAATG GCTTCAGGTC AAATACAAGG ACCTTGCCCA ATTCAAGGCG
AAGACCGGGC TGGACTACGC GTCGTTCGAC GTCATTCCGG CCCCCTCCAA GGACATACGC
AAGGAAAAGC TCAACGGCTT CGGTGAACAC TACGACGCAT TCGCCGACGG CATACTGCCC
GTGGGCGGCT GGCTGTGGGA CCCAAAACAG GCAATCGAGC GCCTGGATCT CTATCTGGAC
GGCAAGCTGG TAGGGCCCGT GGCCCGCGGC CTCAACCGGC TGGACGTCTA CCGCGCCGTG
GACAACATCA CCAGCCCCAA CACCGGGTTC CGCTACAACC TCGACTTCAG CAACCTGTCC
GCTGGACAGC ACATCGTCCA GGTCGTGGCC GAGTCCAAGG GCCGCAAATA CCAGTTGGCC
AATGCCAACT TCGTTGTCGT TCCGCGCAAT CAGGGCAAGA TCGTCAACAT GTACCCCCGG
CGGCTCGGCT GGATGCCGCC CACGTCCATA CTGGAAAAGC AGGGCGTGCG GTCGTGGCTC
GACATGCCGG CGCAACTGCA GGACGTCTAC TACAACCCCT TGGCCCGCGA CTGGAACCAC
TACCGCGAAT CGCAGGTGTA CGCACAGCTT GCGGTGTTCC ACGAACGCGC CATTGCTGCC
GGCCTGCCCG CAGCCAAGCT CTACTCCCAC CAAATCATTC CCGATGTGAA TCCCTCCTGG
AATCCGCAGT TGTTCGCCTC CACCCAGACC CTGGATGGCA ACGCACCTTG GAAGCAGGGC
CTGAACATGT ACGGCGGTGC CACCAACAGC GACTGGCTGC GCGGTTTCAT GAAGCAGCAC
CAGATCGGCA GCGGCTATGG CGCACCTGAA TTCAACCCCC AGCAATGGAA GCTGGAAGGA
ACGCACCTGG CCGCGCTGAA GGCCCACTAC GACGCAGGCG CCACCTTCAT CAGCCCCTAC
TACTTCTCGG TGATCAACCA GCGCTTCAAG GGCGCAGCCG AACACGGCGT CAACCGCATG
GAGCTGTCCC CAGACAACCC CAAGGACGGC TCCGACAAGT TCTACAAGGC CATCGTCGAA
TTCGCCAGGC AGTAG
 
Protein sequence
MPHLPRTVHL PYASTLIAAG LALASMATHA QTGSGATRGQ PLVIAPTVEG MLLCDEAVAE 
TRIKSMDEAY AFCQQRKLDG SAAVNRLLDT LEPGGPKGNV QIGYTATLQL LGLYQRTAKG
WEIDEAKVDS FLNVIRKVQR PVVLYFSADH FDSVGPIAAE LAKDPVNLMQ LRDGKPLELG
YFGYRILPYT LSTDASVPVN HYRFKALEYM ARKIRELPKP VQDRIIAYTL PGELHHMFPD
FENGMGAYQD IRVTDYSPGS VAGFRQWLQV KYKDLAQFKA KTGLDYASFD VIPAPSKDIR
KEKLNGFGEH YDAFADGILP VGGWLWDPKQ AIERLDLYLD GKLVGPVARG LNRLDVYRAV
DNITSPNTGF RYNLDFSNLS AGQHIVQVVA ESKGRKYQLA NANFVVVPRN QGKIVNMYPR
RLGWMPPTSI LEKQGVRSWL DMPAQLQDVY YNPLARDWNH YRESQVYAQL AVFHERAIAA
GLPAAKLYSH QIIPDVNPSW NPQLFASTQT LDGNAPWKQG LNMYGGATNS DWLRGFMKQH
QIGSGYGAPE FNPQQWKLEG THLAALKAHY DAGATFISPY YFSVINQRFK GAAEHGVNRM
ELSPDNPKDG SDKFYKAIVE FARQ