| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5918 |
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| Symbol | |
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| ID | 5751539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6583609 |
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| End bp | 6584811 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641301050 |
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| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
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| Protein accession | YP_001566931 |
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| Protein GI | 160901349 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1189] Predicted rRNA methylase |
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| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCAG ATGTATTTTT GGTGGAAGCC GGCCATGCGG CCACGCGCTC GCAGGCGCAG
CGGCTGATTG CAGGCGGCGT GCAATGGCGC ATGACGCCGC TGACGCCTTG GAAGAAGGTT
GCCAAGAACG GCGACGAGAT TCCTGCGGGT GCCGAGCTGC AGCTGCTGGA CGGGGCCGAG
GCCCGGTTCA TCTCGCGCGG CGGGCTGAAG CTGGAAGGCG CGCTGGCGGC CACCAAGCTG
TCGGTGCAGG GCCTGCGCTG CCTGGACGTG GGCCAGAGTA CGGGCGGCTT CACCGACTGC
CTGCTGCAGG CGGGCGCCGC CCAGGTCATC GGCGTGGACG TGGGCCATGG CCAGTTGCAT
GACCGGCTGC GCTCGGATGT GCGTGTGATC TGCGTCGAGG GCGTCAATGC CCGCGCGGTG
ACGGCCGAGG GCCTGCAGGA GTCCTGCGAG GAAGTGCTGT CCGAACGCTG GGAAGAAGAT
CCCGACGACA ACGACACCCA GCCCGTGGCG CCCTATGCCT GGATGCGCAA CGGCGGTCTG
GTCGATGAAG ACTACGACGA CAGCGACGAC GCCAAGGAAA AAGAGATCGA AGCCTTCAAG
GCCGAGCGCG CGGCCAAGGG CAAGGCCCGG GAAGAAGGCA CGGTGGCCAC GCAGCGCCGC
CGCCGCGCCG AGTTTGCCGA CGTGGACATC ACGCCGCAGT TCGACTTCGT CACGGGCGAT
CTGTCCTTCA TCTCGCTGAC CCTGGTGCTG CCGGCCGTCA CGCGCCTGCT CAAGCCGCAT
GGCCAGCTGC TGATGCTGGT CAAGCCGCAG TTTGAACTGC AGCCGGGCCA GGTCGGCAAG
GGCGGCATCG TGCGCGATGC GGCCCTGTTC ACCGAGGTGG AGCAGCGCAT CCGCACCTGC
CTGGGCGAGC TGGGGCTGGA GGTCAAGGGC TGGATGGAGT CGGCCATCGA AGGCGGTGAC
GGCAACCGCG AATTCTTCGT GCATGCCCAG CAGGCGGCCG TGGTGAAGGA GCCTGCACAG
CCTGAAACGC AGGACGAGGA CGAACCCCGT TCGGCCGTGA AAGCCGCGCC TAAGCCGGCC
GCGCCCAAGC GCGTGTCCCG CACCGTGCTG CGCGAGCAGC GCAACGAGCG TGTGATCGAC
ACCAGCACCG AGTTCGGCGT GCCCGGACCG GGGCGCGCCA AGCTGCGCAA ACGCAACGAA
TGA
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| Protein sequence | MRADVFLVEA GHAATRSQAQ RLIAGGVQWR MTPLTPWKKV AKNGDEIPAG AELQLLDGAE
ARFISRGGLK LEGALAATKL SVQGLRCLDV GQSTGGFTDC LLQAGAAQVI GVDVGHGQLH
DRLRSDVRVI CVEGVNARAV TAEGLQESCE EVLSERWEED PDDNDTQPVA PYAWMRNGGL
VDEDYDDSDD AKEKEIEAFK AERAAKGKAR EEGTVATQRR RRAEFADVDI TPQFDFVTGD
LSFISLTLVL PAVTRLLKPH GQLLMLVKPQ FELQPGQVGK GGIVRDAALF TEVEQRIRTC
LGELGLEVKG WMESAIEGGD GNREFFVHAQ QAAVVKEPAQ PETQDEDEPR SAVKAAPKPA
APKRVSRTVL REQRNERVID TSTEFGVPGP GRAKLRKRNE
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