Gene Daci_5902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5902 
Symbol 
ID5751523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6564138 
End bp6564998 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content74% 
IMG OID641301034 
Producthistidine kinase 
Protein accessionYP_001566915 
Protein GI160901333 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAC CTTTCGCACC CCATCCGCCC CCCGACCCCG CCGCCGACCT GCAGGGCCCT 
CCCCGCACGT TGCAGGATGC GCTGGAGCGC CTGGCCCAGC GCGAGCAGGA ACTGCAGGCC
CTGCGCGCCG CGCAGCAGGA ATGGCTGCAT GCGGTGTCGC ACGACCTGCG CGCGCCGCTG
CGCCATGTGC TGTCCTTCGG CCCCCTGGTC GATGAACTGC TGTCGCAGGC CGCACCTTCG
CCGCAGGAGC TGCAGGAGGC GCGCGGCTTC CTGCAGACCA TGGACCAGTC GGCGCGCCGC
ATGGGCGGCA TGCTCGACGG CCTGCTGGCC CTGTCGCGCG CCGCGCGCAC GCCCATGCAG
TGGCAGCCCG TCGCCTTGCA GGAGCTGCTG GAGCAGGCGC GCACGGCGGT GCTGGCGCAG
CCGCGCTGGG CTGCCTGCGG CGCGGCTGCG CGGCTGCAAT GGAGCCTGCC GCAGCAAAGT
CCCGCCGTGC GTGCCGACGC GGCCCTGCTG CGCCAGGTGC TGGAGGCGCT GCTGGACAAC
GCCGTCAAGT TCACCCGCCC CGTGGACCAG CCGCGCATTG CCATCGATGT GGAGCGCCAT
GCCGACGGCG GCATCACGCT CAGCGTGACG GACAACGGCG TGGGGTTCGA CCCCTCGCGC
GCGGGAGCGC TGTTCGGCAT CTTCCAGCGC ATGCACCGCG AATCCGAGTT CCCCGGCCTG
GGCACGGGCC TGGCCCTGGT GCGCGGCGTG ATGCGCCGCC ACGGCGGCGA GGCCACCATC
CGCGCCACGC CCGCGGGCGG CTGCTGCGTT TGCCTGAACT GGCCCGGCGG CGAAGTGCGG
CGCGCCGATC GCGGGCTCTG A
 
Protein sequence
MTEPFAPHPP PDPAADLQGP PRTLQDALER LAQREQELQA LRAAQQEWLH AVSHDLRAPL 
RHVLSFGPLV DELLSQAAPS PQELQEARGF LQTMDQSARR MGGMLDGLLA LSRAARTPMQ
WQPVALQELL EQARTAVLAQ PRWAACGAAA RLQWSLPQQS PAVRADAALL RQVLEALLDN
AVKFTRPVDQ PRIAIDVERH ADGGITLSVT DNGVGFDPSR AGALFGIFQR MHRESEFPGL
GTGLALVRGV MRRHGGEATI RATPAGGCCV CLNWPGGEVR RADRGL