| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5901 |
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| Symbol | |
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| ID | 5751522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6562952 |
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| End bp | 6564112 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641301033 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001566914 |
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| Protein GI | 160901332 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTGC GCCAGCGCAT CCATCGCCGA ACCTACCCCT TGCGCGTCTC CAGCATGGCA
TTGGGCGGCC TCGTCGTGGG CACGGCCATG ACCGAGATGG GCGCCAGCCC GGCGGTATGG
GGCTTTGTGC TGGTGAGCGC CCTGGTCTGG CCGCACATCG CCTTTTTGCA CGCCCGCCAC
AGCCGTGACA GCCACCGTGC CGAACACGCC AATCTGCAGA TAGACGCGCT GATCATCGGC
AGCTGGATTC CCGTGATGCA TTTCTGCGCA TTGCCCAGCA TTGCGCTGCT GGCCATCAGC
ATTGCCGACC GCAACCACAC GGCCACGCGC GACGGCTGGC TGCAATCGCT GGTGGCCACC
TTGCTGGCCG CCGCGCTGGT GGCCCTGCTG CTGCGGCCCG TGCCCGACTG GGAGGCCAGC
CTGGCCGTGC AGCTGAGCAT GCTGCCCCTG CTCCTGCTGC ACAGCGTGTT CTCCAGCTGG
TCCACGCGCC AGCTGGTGCG CAAGCTGGCG CGCCAGAACG TGAAGCTGCA GGTGCTCAGC
CGCATCGACC CGCTGACCAC GCTGTACAGC CGGGACTACT GGTGGCAAAA GGCCCGCGCC
GCGCTGCGCG ACTACCGGCA GACGCAGGCC TCGGCCTGCC TGCTGATCGT GGACATAGAC
CACTTCAAGC GCATCAACGA CAGCTTTGGC CACACCGTGG GCGACGAGGT GCTGCAGGCC
ATAGGCCTGA CCATCCGGCA CTGCCTGCGC TCGCACGACG CGGCTGGCCG CTATGGCGGT
GACGAGTTCG CCGTGCTGTG CATGCACACC CAGCTGGACG ACGCCTATGC GGTGGCGCTG
CGCATACGCA ACCAGTTGAG CCAGCTGCGC GTGCGCGAGC ATCCCCAGCT GCGCGTGAGC
GCCAGCATTG GCGTGGCGGC GGCGGACCCG AGCTTTCTGT CGGTCAAGGA CTGGATCAAT
GCGGCCGACA GCGCGCTCTA CAGCGCCAAG GATGCCGGGC GCGACCAGGT GATTCCCGCC
GCGCCGCTGA TGGCCGGCAG CGCGCCTGCC CAGGCCGGAA CAGCCTCGGA CACAGACCCC
GATAAAGGCT CCCAAGTGGG CCCGGACACC AGGGACTCCC GCCCCACGCA CCAGCCCGAG
CCGGACGACA CGCTGATCTG A
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| Protein sequence | MSLRQRIHRR TYPLRVSSMA LGGLVVGTAM TEMGASPAVW GFVLVSALVW PHIAFLHARH
SRDSHRAEHA NLQIDALIIG SWIPVMHFCA LPSIALLAIS IADRNHTATR DGWLQSLVAT
LLAAALVALL LRPVPDWEAS LAVQLSMLPL LLLHSVFSSW STRQLVRKLA RQNVKLQVLS
RIDPLTTLYS RDYWWQKARA ALRDYRQTQA SACLLIVDID HFKRINDSFG HTVGDEVLQA
IGLTIRHCLR SHDAAGRYGG DEFAVLCMHT QLDDAYAVAL RIRNQLSQLR VREHPQLRVS
ASIGVAAADP SFLSVKDWIN AADSALYSAK DAGRDQVIPA APLMAGSAPA QAGTASDTDP
DKGSQVGPDT RDSRPTHQPE PDDTLI
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