| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5859 |
|---|
| Symbol | |
|---|
| ID | 5751480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6516466 |
|---|
| End bp | 6517032 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641300991 |
|---|
| Product | transcriptional regulatory protein NfxB |
|---|
| Protein accession | YP_001566872 |
|---|
| Protein GI | 160901290 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.731668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCA CCAAGCAAGA GGACGAAGGC AAGCTGCTGG GCGCACTGGC ACTGGCGCTG
CTGGACGATC CCAAGGCCAA TCTGCAGGAG CTGGCACGCG CCATCGGCAT CAGCAAGGCC
ACGCTCTACC GCTTCTGCCC CACGCGCGAC CAGCTCATCG ACCGGCTCAT AGGGCATGCG
GCCGACACCC TGTCGCGCGC CATGCACGCG GCCGAGCTGG AGCGCCACGC GCCGCTGGAG
GCGCTGCGCC GCCTCACCAC CCACTGCCAG GACCACCAGA CGCTGCTGCT GTTCCTGATG
TATTTCTGGC GCTCCGACAT CTCGGTGGTC GGCCAGATAG AGAGCGAATG GGTGGCGGCC
ATGGATGCCT TTTTCCTGCG CGGTCAGCAG GCCGGCGTGT TCCGCATCGA CATCACGGCA
GCGGCGATGA CCGAGCTGTG GCTTTCCATG GCCGTGGGCC TGCTGGATGC GGAGCGGCGC
GGCCGTGTTG CGCGGGCCAG CGTGGCGGCC GTGATGGAGC AGTCCTTCCT GCACGGCGCC
CTGCAGCCCG GCGCACCGGC CGCGTAG
|
|---|
| Protein sequence | MTSTKQEDEG KLLGALALAL LDDPKANLQE LARAIGISKA TLYRFCPTRD QLIDRLIGHA
ADTLSRAMHA AELERHAPLE ALRRLTTHCQ DHQTLLLFLM YFWRSDISVV GQIESEWVAA
MDAFFLRGQQ AGVFRIDITA AAMTELWLSM AVGLLDAERR GRVARASVAA VMEQSFLHGA
LQPGAPAA
|
|---|
| |