| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5793 |
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| Symbol | |
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| ID | 5751414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6447162 |
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| End bp | 6448097 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641300925 |
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| Product | fimbrial protein |
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| Protein accession | YP_001566806 |
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| Protein GI | 160901224 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0492679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACCC CGGCAGCATC CATCATCCAA TTACCGGAAA GCATCAACGT TCCCGCAGGA
AATATCATGA ATGGATCAGT GCTATGGGAC TCGCCCATGG TCAAATCCAC CCTCGACACA
ATTTCCTACA GTGTGCTTTC GGGGCCATCT TCAGAAATAT GGCCCCAAAT CATGAACGCC
ACTACGCTGG ACGGCGATAT CTACTCCACA TCTTTGCGCG GAATAGGAAT CCGTTGGCGT
GCCATATGGA AAGCCAGGAA TTTCCCCAAT GGCAAAACCA TGTCCATCAC CACTACGTCC
AACAATGCAG GAGCCACGGG ATGGCAAAAG GATGATGTAC ATGAGCAAAC CATATGGATG
CAACTCATCA AGACAGGCGC CGTTCAATCG GGCACTTTCA GCGTCAGCAG CTATGCATCC
GCCCGGTTTG ACTGCAATAG CCTTTGCAAT AGCTGGATCG TGATGGCGGC CGGCAGCACC
GTGGTGCGCA CAGGCGCCAG TTGCCGGGTG AAGACGAGCA ACATCGCCGT GAAACTGCAG
CGAGTCAACA GGTCACAGTT CAACGGGATA GGCGCTACCT CCGCGCCCCA GTCATTCGAT
CTGGAACTGA TCTGCACCGG GGGCGAAGCC AATTCCACCC TGCGCCCGTT CGTCACGCTC
ACGGATGCCA ACGATGCCGC CAACCGCTCC GATGTGCTGA CGGTGACCGG AGGGGCTGCC
GGCATCGGCA TCCAGATCCG CAGCAGCGAC AAGGTCATCA GCTACGGCGA GGACTCCGCC
AACTTCGGCA ATCCCAACCA GTGGCAGGCG GGCATCATCA CCCCAAACAC CAGCAACCAC
GTGATTCCAT TGACGGCGCG CTATGTCCAG ACCCAGCCCT CCGTCACAAC AGGCTTGGCC
AACGGACGGG CCACCTTCAC GCTCAACTAC CAGTGA
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| Protein sequence | MFTPAASIIQ LPESINVPAG NIMNGSVLWD SPMVKSTLDT ISYSVLSGPS SEIWPQIMNA
TTLDGDIYST SLRGIGIRWR AIWKARNFPN GKTMSITTTS NNAGATGWQK DDVHEQTIWM
QLIKTGAVQS GTFSVSSYAS ARFDCNSLCN SWIVMAAGST VVRTGASCRV KTSNIAVKLQ
RVNRSQFNGI GATSAPQSFD LELICTGGEA NSTLRPFVTL TDANDAANRS DVLTVTGGAA
GIGIQIRSSD KVISYGEDSA NFGNPNQWQA GIITPNTSNH VIPLTARYVQ TQPSVTTGLA
NGRATFTLNY Q
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