| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5771 |
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| Symbol | |
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| ID | 5751392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6425362 |
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| End bp | 6426183 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300903 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001566784 |
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| Protein GI | 160901202 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000135375 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAATG AAGCCACCCT GAACACCGGC GGCGCGCCCC GTCCGCTGCC CGCCGCCCTG
CTGCGCGCGG CGCGCAGCCC CTGGCTGATC GCAGGCGCCG CACTGCTGGC CCTGTGCGCC
TGCTGGGCCG CCACGGACAG CGCCCCGCCT GCCTTCGTGC ACCTGTGGAA ATGGCTGCCC
GCGCTGCTGC GCGGCCTCCT GGTCAACATC GAGATCAGCG TGCTGGCCGT GGCCATCGGC
ACCGTGGCCG GCCTGGTGCT GGGCGCCCTG TCGCTGTCGC CCACGCCGGC CGTGCGCACG
GGCGTGCGCT GGTACGTGCA GCTGTTTCGC AATGCGCCCA TCCTGGTGCT CATCTACTTC
ACCACCTATG TGTTCCCGTT CGAGCTGAAG CTGGTGGGCT GGACCTTTCC GTTCCCCGAC
TGGGTCAAGG TGGTGCTGGG CCTGGCCCTG CCCACCAGCG CCAACGTGGC CGAGATCTTC
CGGGGCGCCA TCCAGTCCAT TCCCAGCGCG CAGTGGGAGG CGGCCCAGTC GCTGGCCTTT
CGCCGCAGCG AGATCTTCCG CCTCATCGTG CTGCCGCAGT GCGTGCGCCG CATGCTGCCG
CCGTGGATGA ACCTCTACGC CAGCATCACC ATGAGCACCT CGCTGGCCTC ACTGGTGGGC
GTGCACGACG TGGTAGACAC CGCCCAGATC GCCAGCAACA CCGTGGCACG CACGGACTTC
ACCATCCTTG TGTACTTCAC GCTGCTCGCG CTGTTTTTCG CCTATTGCTA TCCGATTGCC
CGCGCCACCC GCGCCCTGGA GCGACGCCAT GAAAATCACT GA
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| Protein sequence | MANEATLNTG GAPRPLPAAL LRAARSPWLI AGAALLALCA CWAATDSAPP AFVHLWKWLP
ALLRGLLVNI EISVLAVAIG TVAGLVLGAL SLSPTPAVRT GVRWYVQLFR NAPILVLIYF
TTYVFPFELK LVGWTFPFPD WVKVVLGLAL PTSANVAEIF RGAIQSIPSA QWEAAQSLAF
RRSEIFRLIV LPQCVRRMLP PWMNLYASIT MSTSLASLVG VHDVVDTAQI ASNTVARTDF
TILVYFTLLA LFFAYCYPIA RATRALERRH ENH
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