| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5765 |
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| Symbol | |
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| ID | 5751386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6419111 |
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| End bp | 6419971 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641300897 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001566778 |
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| Protein GI | 160901196 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000625971 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACACAA GCCCCACCCT GCGCCGCCAG CCCCGCGCCA CCCTTTCCGC ATCCCTGACC
TTCATCGCCG CCGCGCTGGC CCTGGCCTGC ACCCAGGCCC GGGCCGATGC CACGCTGGAC
AAGATCAAGC AGCGCGGCAA GGTCACCATT GGCGTGCTGG TCAATGGCGG GCCCTTCGGC
TCCATCGACC CGTCCACCCA GCAGCTGGTG GGCTGGAACC CCGAGCTGGC ACGCGCCCTG
GCCAAGGGCC TGGGCGTGGA GGCCGAGCTG GTCCAGGTGC AGACCGCCAC GCGCGTGCAG
TTTCTGCAGG CCGGCAAGGT GGATCTGCTG ATCGCCTCCA TGGAGCTGAA CCCCGACCGT
GCCGAGACCC TGGGCTACGC GCCCACGCCC TTCTACCGCG TGGGCGGCAT TGCCGCCGTG
CGCAAGGGCA GCGGCATCGC CAGGTGGGAA GACCTGCGCG GCAAGCCGGT GTGCGTGTCC
CAGGGCAGCA GCTTTGCCAA GCCGCTGGCC AGCGAGTACG GCGCCCAGGT GCATGGCTAC
AAGAGCTCGT CGGACTCGCT GTTGGCGCTC AAGGGCGGCA ACTGCGTGGC CGCCGTGCAT
GACAGCACGC TGATCTACCC GCTGCTGCGC AGCAACCCCG AATGGGCGCA GTACTCGGCC
CCCATCGCCG GCGAGGTGCT GCCCGCGCCT TCCGTGGTCT GGACCCGCAA GGGCGAGGCC
GACACCATCG CCGCCGTGGA CAAGGTGGTG CAGGACTGGC ACCGCACGGG CTGGCTGATC
GCCGCCGAAA AGCGCGTGGG CATCGAGCCG GCCAACCCGC TGCTGCCCGA GCTGCAGGCC
AAGTTCAAGT CCGCCAGCTG A
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| Protein sequence | MHTSPTLRRQ PRATLSASLT FIAAALALAC TQARADATLD KIKQRGKVTI GVLVNGGPFG
SIDPSTQQLV GWNPELARAL AKGLGVEAEL VQVQTATRVQ FLQAGKVDLL IASMELNPDR
AETLGYAPTP FYRVGGIAAV RKGSGIARWE DLRGKPVCVS QGSSFAKPLA SEYGAQVHGY
KSSSDSLLAL KGGNCVAAVH DSTLIYPLLR SNPEWAQYSA PIAGEVLPAP SVVWTRKGEA
DTIAAVDKVV QDWHRTGWLI AAEKRVGIEP ANPLLPELQA KFKSAS
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