Gene Daci_5749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5749 
Symbol 
ID5751370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6402791 
End bp6403558 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content73% 
IMG OID641300881 
ProductABC transporter related 
Protein accessionYP_001566762 
Protein GI160901180 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000656904 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGATC AAGCCATGGA CGACGCCGTG CCACGCCTGC AGGCCCGGTC CCTCACGCTG 
CGCCATCGTG GCCGCAGTGT GCTGGACGCC GTCTCGCTGC AGCTGCCCGC CTGCGGCGCC
GTGGCCCTGG TGGGGCCCAA TGGCGCGGGC AAGTCCAGCC TGCTGTCCCT GCTGGCGGGG
CTGCAGGCGC CTGCATCCGG CAGCGTGCTG CTGGACGGGC AAGACATTGC AACCCTGCCC
GTGGCCGAGC GCGCGCGCCG CGTGGGCTAC ATGCCCCAGC GCTTTGCGCC GCACTGGGAC
CTGACGCTGG CCGAGCTCAT GCACATGCGG CTGGCGGGCC GGGGTGATGT CGAGGCGGCC
ATTGCAGGCG CCGGGCTGCA GGATTTCGCG CGCAGGCGCT GGTCCACGCT GTCCGGCGGC
GAGCAGGCGC GTGCCCTGCT GGCCACCGTG CTGGCCACCG ACCCGCCCGT GCTGCTGGCC
GACGAGCCCG GCGCCGCGCT GGACGTGCGC CACCGCCTGG CCCTGGTGCA GGCGCTGGCG
CAGCGCGGGC GCGAGCGGCT GGTGCTGGTG GTCATGCATG ACCTGGACCT GGCGCTGGCG
CACTTCGGGC GCGTCATCGT GCTGGACCAG GGGCGCATTG CGCTCGATGG AGCCCCTGCC
GAGCTGCTGC ATGCGCCGGG GCTGGATGCC GTGTTCGGCG TGGATTTCGA GCGCATCGAC
GCACCTCCGC AAACCTTGCT GCGCGCGCGG CTGAAACAGG AGAACTGA
 
Protein sequence
MNDQAMDDAV PRLQARSLTL RHRGRSVLDA VSLQLPACGA VALVGPNGAG KSSLLSLLAG 
LQAPASGSVL LDGQDIATLP VAERARRVGY MPQRFAPHWD LTLAELMHMR LAGRGDVEAA
IAGAGLQDFA RRRWSTLSGG EQARALLATV LATDPPVLLA DEPGAALDVR HRLALVQALA
QRGRERLVLV VMHDLDLALA HFGRVIVLDQ GRIALDGAPA ELLHAPGLDA VFGVDFERID
APPQTLLRAR LKQEN