| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5680 |
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| Symbol | |
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| ID | 5751300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6318952 |
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| End bp | 6319530 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641300812 |
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| Product | porin |
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| Protein accession | YP_001566693 |
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| Protein GI | 160901111 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.024221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.409431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCCCTG GTGGCGCCAT CAAGACGGCC GGCGGCTATC TGCGCTACTC GCAAAGCGGC
ATCTCCGCAG GCGCCGGCTA CCTGGGCACC ACGCTGCCGG CCGGCACCAA GGTCGATGCC
TATACCCTGG GCGGCTCGTA CCGTGTGGGT CCCTGGTACG TCAACCTGGG CTACGGCCTG
AACAAGCGCA AGGACGCATT CCCGGCGGCA ACCGCAGGCG GTGGATTCGA CCAGGCCATC
CTCAATTCCT TCTGGACGGG CTCGTCCAAC GGCGGCTTCG TGGCTGGCGA CGCCAACAAG
CGCCAGATGT ACAAGATGGG CTTCGGCTAC CAGATCACGC CCCAGATCAA TGTGGGCGCG
CATTACTACC ATGCCAAGCA GTCGGGCTCG GGCACGGGCA ATTTCAATGG CAAGGCGGAC
TTCCTGGTGG CGGTGGTCGA CTACGCCTTC TCCAAGCGTA CCGATGCCTA TGTGGCCCTG
GACCACACCA AGACCAGCGG CGGCTCGGGC GTGATGCTGG ACGCCAATGG CGCCACCAAG
CGCACGGGTT TCACCGTCGG CCTGCGCCAT CGCTTCTGA
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| Protein sequence | MSPGGAIKTA GGYLRYSQSG ISAGAGYLGT TLPAGTKVDA YTLGGSYRVG PWYVNLGYGL
NKRKDAFPAA TAGGGFDQAI LNSFWTGSSN GGFVAGDANK RQMYKMGFGY QITPQINVGA
HYYHAKQSGS GTGNFNGKAD FLVAVVDYAF SKRTDAYVAL DHTKTSGGSG VMLDANGATK
RTGFTVGLRH RF
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