Gene Daci_5640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5640 
Symbol 
ID5751260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6271386 
End bp6272063 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content60% 
IMG OID641300773 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001566654 
Protein GI160901072 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.465258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00190893 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGCAC TTACCCTGAT AAGCCACCCG CTGTGCCCCT TCGTCCAGCG CGCCGTGATC 
GTGCTTCTTG AGAAGGGTGT GGAATTCGAT CGGATAGACG TCGATCTGTC AGCCAAGCCA
GACTGGTTCT TGGCACTTTC ACCGACCGGC AAGGTGCCGG TGCTCAAGGT GCGCCAAGCG
AATGCCGAGG ACGCGATCCT GTTCGAAAGC GTGGTCATCT GCGAGTACCT CAATGAAACG
CAAGGCGGTG CGCCGATGTA CCCCGTTGAT GCATTGCCTC GCGCACAGCA CCGCGCGTGG
ATCGAGTTTG CCGCCCAGAC CTTCGCCGAA GGCTGGCAGT TCCTCCACGC TCGCGACTCT
GCAACCGCCG ATGCCAAGCG CGCTGCATTT CGCGAACGGC TGGGCAAGCT GGAGTCAGAA
ATGGATACAG GGCCATTTTT CGCAGGCCAG GCCTTTGGCA TGGTCGATGC GGTTTACGCC
CCGCTGTTCC GATACTTCGA CATCACCCCC GCGACGGTCG CGTATCAGAT CTTCGACGGC
CTTCCGCGCA TTTCAGCGTG GCGATCGGCG CTTGCGGAGC GCCCCAGCGT GAGGCATGCC
GTCGTCGAAG ACTATGCCGA TCGTTTCCAG AGGCATCTGC GCGAGCAAGG CTCATTCATC
GCTGTTTCCT CACGGTAA
 
Protein sequence
MTALTLISHP LCPFVQRAVI VLLEKGVEFD RIDVDLSAKP DWFLALSPTG KVPVLKVRQA 
NAEDAILFES VVICEYLNET QGGAPMYPVD ALPRAQHRAW IEFAAQTFAE GWQFLHARDS
ATADAKRAAF RERLGKLESE MDTGPFFAGQ AFGMVDAVYA PLFRYFDITP ATVAYQIFDG
LPRISAWRSA LAERPSVRHA VVEDYADRFQ RHLREQGSFI AVSSR