| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5638 |
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| Symbol | |
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| ID | 5751258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6269425 |
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| End bp | 6270333 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641300771 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001566652 |
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| Protein GI | 160901070 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.360222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00205655 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCGAT TTCTCTTGAT GAGCTGCTTC GCGCGCGCCG TAGAAACTGG AAGCTTTTCT
GCTGCGGGGC GTGATCTGGG CCTGGGGCAA CCCAATGTCA GTCGCTATGT GGCGGCGCTG
GAAGATCATT TGCAGGCGCG CCTGCTCCAC CGGTCCACGC GAAAGCTATC TTTGACGCCG
GAGGGCGAAC GCTACTACGC GGACATCCGG CGAATCCTGG ATGCGGTAGA TGAATCCGAA
TCGTCCTTCA GGAACAACGT CGAGCCATCA GGACTCTTGC GCGTAGCCTG CCCAACGGCT
CTCGCACACG CATTTGTGTT GCCACACGTG CCGACCTTTT TGGAGCGCTA TCCCCAATTG
ACCTTGGATC TTCAATTCAA CGATCGATAC GTGGACTTGG TCAACGAAGG GACCGAAATC
GCCATTCGCA TCGGACACTT GGAGGACAGT AGCTTGCGGG CCCGGCGTCT TGGATGGTAC
GACCGCGTCT TCGTGGCCAG CAAGGACTAC CTGGCCAAAC GTGGAGTTCC GCAGACTCCA
GATGACCTGC GCGATCACGA TTGCATCATC TACACCCTGT TGTCGTCCGG GGCGATCTGG
CGATTCCGTG ACGCGGACAT CCCGGTTTCC GGCAGGCTCA GGGTGAACTC GCCCGACGCA
GTGAGTGCCG CGGTCACGGC AGGCCTGGGC GTAGCACAAG GACCTGCGTG GCTGTTTGAG
GGTGGGCTGA ACAGCGGCCG ATTGCAGTTC ATTTTGACGG ATCATGCAGC TCCGCCCGTA
CCGGTGCAGA TCGTCTATGT GGCCAACAGG TTGCTACCCA CGCGGGCTGT CGTGTTCATG
GACTTTATGG GTGAGTTGTT TTCGAGGATT CCTGCCTTGA ATGGCCGCAC TCCTTTGCCG
AATCTATAA
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| Protein sequence | MDRFLLMSCF ARAVETGSFS AAGRDLGLGQ PNVSRYVAAL EDHLQARLLH RSTRKLSLTP
EGERYYADIR RILDAVDESE SSFRNNVEPS GLLRVACPTA LAHAFVLPHV PTFLERYPQL
TLDLQFNDRY VDLVNEGTEI AIRIGHLEDS SLRARRLGWY DRVFVASKDY LAKRGVPQTP
DDLRDHDCII YTLLSSGAIW RFRDADIPVS GRLRVNSPDA VSAAVTAGLG VAQGPAWLFE
GGLNSGRLQF ILTDHAAPPV PVQIVYVANR LLPTRAVVFM DFMGELFSRI PALNGRTPLP
NL
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