Gene Daci_5636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5636 
Symbol 
ID5751256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6267877 
End bp6268290 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content67% 
IMG OID641300769 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001566650 
Protein GI160901068 
COG category[R] General function prediction only 
COG ID[COG3565] Predicted dioxygenase of extradiol dioxygenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00171085 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCACCA GCTTCCACCT TGCCTACCAT GTCCGCGATC TGGACGAAGC GCGCGCCTTC 
TACGGCACGC TGCTCGGCTG CCAGGAAGGC CGCAGCACCG AGACCTGGGT GGACTTCGAC
TTCTTCGGCC ACCAGATCTC GCTGCACCTG GGCGAGCCCT TCCCGGTCAC GAACACCGGC
CGCGTGGGCG ACCACATGGT GCCCATGCCC CACCTGGGCC TGGTGATGGC CATGGACGAC
TGGAAGGCCC TGGCCGCGCG GCTGTCGGGC GGCGTGGTGG ATTTCGTGCT GCAGCCCGGC
ATCCGCTTCG AGGGCGAGCC CGGCGAGCAG GCCACCATGT TCTTCCGCGA CCCCAGCGGC
AATCCCATCG AGGTCAAGGG CTTCGCCGAC CTGGACAAGG TCTTCGCCAA ATGA
 
Protein sequence
MRTSFHLAYH VRDLDEARAF YGTLLGCQEG RSTETWVDFD FFGHQISLHL GEPFPVTNTG 
RVGDHMVPMP HLGLVMAMDD WKALAARLSG GVVDFVLQPG IRFEGEPGEQ ATMFFRDPSG
NPIEVKGFAD LDKVFAK