Gene Daci_5628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5628 
Symbol 
ID5751248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6258517 
End bp6259515 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content71% 
IMG OID641300761 
Producthypothetical protein 
Protein accessionYP_001566642 
Protein GI160901060 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0980091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.111826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC TGACACGGCT GAAGGGGCCG GTGCTGGGCG CCTTACTGGG TGCGCTGGCT 
GCCTTGCCCA TCGCCAGCAT GGCCTCGTCC AGTGCGCCCG CCGCCTTTCC CGAGCCGGGC
AAGATGGTCA AGGTCATCGT CCCGTTCGTG GCGGGCGGCG GCGTGGACAG CGCGGCGCGC
CTGTTCGCCG AGCAGTTGCG CAAGCAGCTG GGCACGACGG TCATCGTCGA GAACCGCGTG
GGCGGCAGCG GCGTGGTGGG GGGCCGTGCG GTGCTGGCGG CTGCCCCCGA TGGCTACACC
CTGCTGTTCT CGGCCGCCAC GCATGTGCTG GCCAAGCAGG TGCTGGCCCA TCCGCCCTAT
GACCCGCAGA CCGACTTTGT CCCCGTGGCG CGCGTGGGCG AGGCGCCGCT GATGCTGGTG
ATCTCGCCGC AGCTGCCCCA CAGCAAGCTG GGCGAGGTGC TGGCCGCAGG CGCCAAGAGC
ACGTGGACGG CGGCCATTCC CGCCGTGGGC GCGCCCAGCC ACCTGGCCAC GCTGCTGCTG
GCCCAGCAGG GCCGCATGCG CCTTGAGTAC GTGCCCTACA AGGGCACGCA GCCCGCGCTG
GTGGATGTGG GCGGCGGCCA TGTGGACCTG CTGCTCGACT CCATGGTCTC CGTGCTGCCG
CTGGCCAAGG CCGGCAAGGT GCGGCCGATT GCCATCACCT CCGGCAAGCG CAGCCCGCTG
GCGCCCGAGG TGCCCACCAT GCAGGAAAGC GGCCTGCCGC GGTTTGCCTA CACCTCCTGG
TACGGACTGT GGGCGCCCAA GGACACGCCT GCCGACCGGG TGCAGCGGCT GAACCAGGCC
TCCAACGCGG CGGTGGCCGA GCTGGCCAGG TCCGGCGCCT TCGCGAGCCT GGGCATCGAC
ACGGTTTCGG AGAGCACCGA GCAGTTCAAG CGCTTCATCG CCGCCGATGT GGCGCAGAGC
GCCGCGCTGC TCAAGGGCGC GGGCTTCAAG CCCGAGTAG
 
Protein sequence
MKTLTRLKGP VLGALLGALA ALPIASMASS SAPAAFPEPG KMVKVIVPFV AGGGVDSAAR 
LFAEQLRKQL GTTVIVENRV GGSGVVGGRA VLAAAPDGYT LLFSAATHVL AKQVLAHPPY
DPQTDFVPVA RVGEAPLMLV ISPQLPHSKL GEVLAAGAKS TWTAAIPAVG APSHLATLLL
AQQGRMRLEY VPYKGTQPAL VDVGGGHVDL LLDSMVSVLP LAKAGKVRPI AITSGKRSPL
APEVPTMQES GLPRFAYTSW YGLWAPKDTP ADRVQRLNQA SNAAVAELAR SGAFASLGID
TVSESTEQFK RFIAADVAQS AALLKGAGFK PE