Gene Daci_5626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5626 
Symbol 
ID5751246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6256188 
End bp6257168 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content73% 
IMG OID641300759 
Productalcohol dehydrogenase 
Protein accessionYP_001566640 
Protein GI160901058 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.20358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.110388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAT TGATCAAGGT CCGCATGGAC GCCGCAGGCA CCCCCGACGC CATGCGCCTG 
GAGCCGGTCG AGGTGCAGGC GCCCGGCCCC GGCCAGGTCT GGCTGGAGCA GACGGCCATC
GGCGTGAACC CGCTGGACGT GAGCCAGCGC AAGGGCGCTG TCGCCATCGC CTTTCCCTCG
GGCCTGGGGC TGGAGGGCGC GGGGCGGGTG GCCGCCGTGG GCGAGGGCGT GACGAATGTG
GCCGTGGGCG AGCGCGTGGG CTACGCCACG GGGCCGCTGG GCGCCTATGC CAGCGCCCGC
CTGTATCCGG CCGAGCGCCT GGTGAAGCTG CCCGATGCGC TGCCTGACGA CGCGGCGGCG
GCCGTGCTGT TCAAGGGCAT CACGGCGCAG TACCTGCTCA AGACCACCCA TGCCGTGGGC
CCCGGCAGCC GCATCGTGAT CTATGGCGCC GCCGGTGCGC TGGGCCAGTT GATGTGCGCC
TGGGCCAGGC ACCTGGGCGC CCTGGTGATC GGCGTGGTGT CCAAGGCCGC CAGCGTGGAG
CGCGCGCGGG CGGCCGGCTG CGACGAGGTC TTCGTGTTCG ATGCGGCCAC GCTGCCGGGC
CAGGTGCTGC AGGCCACCGG GGGCCTGAAG GCCGACGTGG TCTACGACCC CATCGGCCGC
ACGACGCTGG GCGCCTCGCT GGACTGCCTG CGCCCGCGCG GCCTGCTGGT GTCCTTCGGC
GCGACCTCCG GCCTGCCCGA TCCCATCTCG GTGGCCACGC TCAATGCCAA GGGCTCGCTG
TTCCTCACGC GCCCCTCGCT GGCCGCGCAC ACGGCCACGG CGGCCGAGTA CCAGGAGCGC
GCACGGGACG TGCTGGCCGC CGTGGCGGCC GGCATCATCG TGCCTAGCGT CTGGCGCCGG
TATGCGCTGG CGGAGGTGGC GCAGGCGCAT GGCGATCTGG AGCAGGGACG CTCCCAAGGT
GCGATCATCC TGACCCCATG A
 
Protein sequence
MNPLIKVRMD AAGTPDAMRL EPVEVQAPGP GQVWLEQTAI GVNPLDVSQR KGAVAIAFPS 
GLGLEGAGRV AAVGEGVTNV AVGERVGYAT GPLGAYASAR LYPAERLVKL PDALPDDAAA
AVLFKGITAQ YLLKTTHAVG PGSRIVIYGA AGALGQLMCA WARHLGALVI GVVSKAASVE
RARAAGCDEV FVFDAATLPG QVLQATGGLK ADVVYDPIGR TTLGASLDCL RPRGLLVSFG
ATSGLPDPIS VATLNAKGSL FLTRPSLAAH TATAAEYQER ARDVLAAVAA GIIVPSVWRR
YALAEVAQAH GDLEQGRSQG AIILTP