Gene Daci_5620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5620 
Symbol 
ID5751240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6249022 
End bp6250218 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content73% 
IMG OID641300753 
Productcytochrome c, mono-and diheme variant-like protein 
Protein accessionYP_001566634 
Protein GI160901052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.235606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA GCGACTCCCC CGACTGGCTC AACCCCTTGA TCGGCGCCAT GCAGCAGGCC 
CAGGTCGGCC TGCTGCAGCT GCTGCATGGC CTGGGCCTGG CCGGCACGGT GGACGGCCAG
CCTGCCTGGC CCTGGGCCCT GCGCCTGTCC GGCGAAAACC TGCTGATCGA CCTGGGCCAG
GCCCGGGGCC TGCTGTGGTC GCTGGCGGCC GTGGCCACCG CCATCGTTTT GCTGGTGCTG
GCGCTGGTGC TGGTCCTGGT TCTGCGCCGC ATCCGCCTGC CGGCCCTGGT GCTGACCGCG
CTGGCCGCGC TCGCCCTGCT GCTGGCCCCC TGGCCGCGTG CCGACCTGAT CCTGGTGCCC
GCGCATGCCA CCAGCTTCCA TGCCTCGCCC ACGGGCTTCA GCGTGGAGAG CATTGCGCGC
GGCGGCGCCA CCTATGCCCA GCACTGCACG GCCTGCCACG GTGCCGATGG CCGGGGCCAC
GGCCCGCTGG CCGCCAGCCA GCCGGTCTGG CCTCCCAACT TCACCAGCCC GCTGCTGTGG
CGCCGCGCCG ATGGGGAATT GCTCTGGGCC ATTCTTCATG ACCGCCGCCC CGTGGAGTCT
GGCGATGGCG CACGGGCACA CGGCCAGGCC GACCGGCTGT CCAGCGACGA CGCCTGGGCC
CTGATCGACT TCATGAAGGC CCGCGCCGCA GGCCAGATGC TGCAGATCGC CGGCAGCTGG
CCCTATCCCG TGGGCCTTCC CGACATGGCC GTGCAGTGCG CAGGCCAGCC CGCACGCCGC
CTGAGCACCT GGCAAAGCCG CCAGCAGCGG CTGAGGGTGG TGGCAGGCAG CGGCCCGGTG
CAGGAAGACC CGCGCCTGGT CAGCCTGCAG CTGTCGCCCG ATGGCGGCAA CCGCGCCGCC
AGCGCCCTGG ACTGCACCGT CAACGACCCG CGCGCCTGGC AGGCCATGGC CCTGCTCAGC
GGTTCGGAGC AGCTGCAGGG CATGCAATGG CTGGGCGACC GCAGCGGCTG GCTGCGCGCG
CTATCGCGTC CGGGCGCCCA GGGCTGGTCG GAGGACGACC TGGTCTGCCG CACGGACACG
GCGGCCAAGG CCACCTCCGG CGTTGGCGCT GGCGCCTTGG CCGACGGCCT GGGCGCGCTG
ATTGCACGCA TGGACGCCGA GCCCGTGCGG TTCATCAAGG GTGGGTTTGT GCATTGA
 
Protein sequence
MQRSDSPDWL NPLIGAMQQA QVGLLQLLHG LGLAGTVDGQ PAWPWALRLS GENLLIDLGQ 
ARGLLWSLAA VATAIVLLVL ALVLVLVLRR IRLPALVLTA LAALALLLAP WPRADLILVP
AHATSFHASP TGFSVESIAR GGATYAQHCT ACHGADGRGH GPLAASQPVW PPNFTSPLLW
RRADGELLWA ILHDRRPVES GDGARAHGQA DRLSSDDAWA LIDFMKARAA GQMLQIAGSW
PYPVGLPDMA VQCAGQPARR LSTWQSRQQR LRVVAGSGPV QEDPRLVSLQ LSPDGGNRAA
SALDCTVNDP RAWQAMALLS GSEQLQGMQW LGDRSGWLRA LSRPGAQGWS EDDLVCRTDT
AAKATSGVGA GALADGLGAL IARMDAEPVR FIKGGFVH