Gene Daci_5616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5616 
Symbol 
ID5751236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6244375 
End bp6245802 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content71% 
IMG OID641300749 
ProductO-acetylhomoserine/O-acetylserine sulfhydrylase 
Protein accessionYP_001566630 
Protein GI160901048 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID[TIGR01326] OAH/OAS sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.577602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.451549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAG CGACCGGCAC CGAGTCCGCC CCGCACGACG CAGCCAGCGA TGCGCTGTGG 
CAGCAGGACA CCCAGGCCCT GCACGCCGGC TACCGGGGGC GAGAGCAGCA GCGCAGCGCG
GCCGTGCCCA TCTACCAGAG CACCTCCTTC GTGTTCGACA GCGCCCAGCA CGGCGCCAAC
CTGTTCGGCC TGGTGGAGGA GGGCGATGTG TACTCGCGCA CGGCCAACCC CACGCTGGCG
GTGCTGGAGC AGCGCATTGC GGCTCTCGAA GGCGGCGTGG CCGCGCTGGC CCTGGCCTCG
GGCATGGCCG CCATCGACGT GGCACTGGCC ACGCTGGCCA GTGCGGGCGA CCATGTGGTC
GTGGCCTCGC AGTTGTATGG CGGCACGCAC AACTTCATCG CCCATGTGCT GGCCTCGCGC
GGCGTGCAGA GCACGGCCGT GGCCAAGGAT GATTTCCAGG CGTTGCGCCG GGCGATAGGG
CCGCGCACCA AGGCCGTGTT CGTGGAGTCC GTGGGCAATC CATCGGGCGG CATTGCCGAC
CTGCGCCAAC TGGCCGATAT CAGCCATGCG GCGGGCGTGG CGCTGGTGGT GGACAACACC
GTGGCTTCGC CGCTGCTGCT GCGGCCCTTC GACTGGGGCG CCGACATCGT CGTGCATTCG
GCCACCAAGG CCATTGGCGG ACACGGCAAT GTGCTGGGCG GGCTGATCGT GGACAGCGGC
CGCTTCGACT GGGTGGCGCA CGCGAGGCGC TACCCGCAGT TCAGCGCGCC CGAGCCGGCC
TACCAGGGCT TTGTCTTCAC CGAGAAATTT CCCGACCGGG CCTTCATCGC GCGGGCCCGT
GCCGTGCTGC TGCGCAACTG CGGCGCGGCG CTGGCGCCGC ACAGCGCCTT CCTGCTGCTG
CAGGGCCTGG AGACGCTGGG CCTGCGCCAG GAGCGCGCCA GCCGCAACAC GCTGGCCGTG
ATCGATTTCC TGCAGCGCCA TCCGCTGGTG GAGCGCATAC ACCACGCCAG CCAGAGCGGC
CACGCCGACC ACGCGCTGGC CCTGCGCCAG CTGCGCGGCG GGCATGTGCC GGCGCTGCTG
GGCTTCGAGC TGCGCGGCGG CCGCCCGGCG GCGCGCGCCT TCTATGACGC GCTGCGCCTG
TTCCTGCGCC TGGTCAACAT CGGCGACAGC AAGTCGCTGG CCGCCATTCC TGCCGAGACC
ACGCACAGCC TGCTCAGCGA CGAGGAGCTG GCACGCGTGG GCATTGCGCC CGGGCTGGTG
CGCCTGTCCA TCGGCATAGA GCACCCGCAG GACCTGCTGG CCGACCTGGC GCAGGCGCTG
GAGCAGGCGC AGGGCCATGC GCTGGACCAG GCGGTATTGG CTGCCGAACG CGAACAAGAC
CGCGAACAAA ACCGCGAGCA AGACCGGGAT CAGCGCCTGG CGGCCTGA
 
Protein sequence
MTSATGTESA PHDAASDALW QQDTQALHAG YRGREQQRSA AVPIYQSTSF VFDSAQHGAN 
LFGLVEEGDV YSRTANPTLA VLEQRIAALE GGVAALALAS GMAAIDVALA TLASAGDHVV
VASQLYGGTH NFIAHVLASR GVQSTAVAKD DFQALRRAIG PRTKAVFVES VGNPSGGIAD
LRQLADISHA AGVALVVDNT VASPLLLRPF DWGADIVVHS ATKAIGGHGN VLGGLIVDSG
RFDWVAHARR YPQFSAPEPA YQGFVFTEKF PDRAFIARAR AVLLRNCGAA LAPHSAFLLL
QGLETLGLRQ ERASRNTLAV IDFLQRHPLV ERIHHASQSG HADHALALRQ LRGGHVPALL
GFELRGGRPA ARAFYDALRL FLRLVNIGDS KSLAAIPAET THSLLSDEEL ARVGIAPGLV
RLSIGIEHPQ DLLADLAQAL EQAQGHALDQ AVLAAEREQD REQNREQDRD QRLAA