Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5616 |
Symbol | |
ID | 5751236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6244375 |
End bp | 6245802 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641300749 |
Product | O-acetylhomoserine/O-acetylserine sulfhydrylase |
Protein accession | YP_001566630 |
Protein GI | 160901048 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
TIGRFAM ID | [TIGR01326] OAH/OAS sulfhydrylase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.577602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.451549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCAG CGACCGGCAC CGAGTCCGCC CCGCACGACG CAGCCAGCGA TGCGCTGTGG CAGCAGGACA CCCAGGCCCT GCACGCCGGC TACCGGGGGC GAGAGCAGCA GCGCAGCGCG GCCGTGCCCA TCTACCAGAG CACCTCCTTC GTGTTCGACA GCGCCCAGCA CGGCGCCAAC CTGTTCGGCC TGGTGGAGGA GGGCGATGTG TACTCGCGCA CGGCCAACCC CACGCTGGCG GTGCTGGAGC AGCGCATTGC GGCTCTCGAA GGCGGCGTGG CCGCGCTGGC CCTGGCCTCG GGCATGGCCG CCATCGACGT GGCACTGGCC ACGCTGGCCA GTGCGGGCGA CCATGTGGTC GTGGCCTCGC AGTTGTATGG CGGCACGCAC AACTTCATCG CCCATGTGCT GGCCTCGCGC GGCGTGCAGA GCACGGCCGT GGCCAAGGAT GATTTCCAGG CGTTGCGCCG GGCGATAGGG CCGCGCACCA AGGCCGTGTT CGTGGAGTCC GTGGGCAATC CATCGGGCGG CATTGCCGAC CTGCGCCAAC TGGCCGATAT CAGCCATGCG GCGGGCGTGG CGCTGGTGGT GGACAACACC GTGGCTTCGC CGCTGCTGCT GCGGCCCTTC GACTGGGGCG CCGACATCGT CGTGCATTCG GCCACCAAGG CCATTGGCGG ACACGGCAAT GTGCTGGGCG GGCTGATCGT GGACAGCGGC CGCTTCGACT GGGTGGCGCA CGCGAGGCGC TACCCGCAGT TCAGCGCGCC CGAGCCGGCC TACCAGGGCT TTGTCTTCAC CGAGAAATTT CCCGACCGGG CCTTCATCGC GCGGGCCCGT GCCGTGCTGC TGCGCAACTG CGGCGCGGCG CTGGCGCCGC ACAGCGCCTT CCTGCTGCTG CAGGGCCTGG AGACGCTGGG CCTGCGCCAG GAGCGCGCCA GCCGCAACAC GCTGGCCGTG ATCGATTTCC TGCAGCGCCA TCCGCTGGTG GAGCGCATAC ACCACGCCAG CCAGAGCGGC CACGCCGACC ACGCGCTGGC CCTGCGCCAG CTGCGCGGCG GGCATGTGCC GGCGCTGCTG GGCTTCGAGC TGCGCGGCGG CCGCCCGGCG GCGCGCGCCT TCTATGACGC GCTGCGCCTG TTCCTGCGCC TGGTCAACAT CGGCGACAGC AAGTCGCTGG CCGCCATTCC TGCCGAGACC ACGCACAGCC TGCTCAGCGA CGAGGAGCTG GCACGCGTGG GCATTGCGCC CGGGCTGGTG CGCCTGTCCA TCGGCATAGA GCACCCGCAG GACCTGCTGG CCGACCTGGC GCAGGCGCTG GAGCAGGCGC AGGGCCATGC GCTGGACCAG GCGGTATTGG CTGCCGAACG CGAACAAGAC CGCGAACAAA ACCGCGAGCA AGACCGGGAT CAGCGCCTGG CGGCCTGA
|
Protein sequence | MTSATGTESA PHDAASDALW QQDTQALHAG YRGREQQRSA AVPIYQSTSF VFDSAQHGAN LFGLVEEGDV YSRTANPTLA VLEQRIAALE GGVAALALAS GMAAIDVALA TLASAGDHVV VASQLYGGTH NFIAHVLASR GVQSTAVAKD DFQALRRAIG PRTKAVFVES VGNPSGGIAD LRQLADISHA AGVALVVDNT VASPLLLRPF DWGADIVVHS ATKAIGGHGN VLGGLIVDSG RFDWVAHARR YPQFSAPEPA YQGFVFTEKF PDRAFIARAR AVLLRNCGAA LAPHSAFLLL QGLETLGLRQ ERASRNTLAV IDFLQRHPLV ERIHHASQSG HADHALALRQ LRGGHVPALL GFELRGGRPA ARAFYDALRL FLRLVNIGDS KSLAAIPAET THSLLSDEEL ARVGIAPGLV RLSIGIEHPQ DLLADLAQAL EQAQGHALDQ AVLAAEREQD REQNREQDRD QRLAA
|
| |