Gene Daci_5598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5598 
Symbolpgi 
ID5751218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6225063 
End bp6226625 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content68% 
IMG OID641300731 
Productglucose-6-phosphate isomerase 
Protein accessionYP_001566612 
Protein GI160901030 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.885182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.434558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCCG TCATTCCCCA GCCCCCGCGC TGCGACCATG CCACTGTCTG GCCTGCGCTG 
CACCACCATG CCTTGGCCCT GCGCAAGGGC TTCGATCTGC GCCACGCCTT TGCCGATGAT
CCCGGCCGGT TCGCGCACTT CAGCCAGGAG GCGCCACACT GTTTTGCAGA CCTGTCCAAG
AACCTCTGGG ATGCACCAGC CGAGGCGCTG CTGTTGCGTC TGGCGCGCGA GTGCGCAGTG
GAGCAGCAGC GCGATGCCAT GTTCGCCGGC GAGCACGTCA ACGGCAGCGA GGGCCGCGCC
GTGCTGCACG CGCTGCTGCG CTGCCCGCGC GGCGAGTCGC CGCCGGGCCT GGCATGGGCC
CTGGCCCAGG TGCACGAAAC GCTGGATGCC ATGCTGGCCT ATGCCGAGCG CGTGAGGGCC
GATGCCGGCA TCACCGATGT GGTGTGCATG GGCATCGGTG GATCGGGCCT GGGGCCGCAG
ATGGCCGTGC AGGCGCTGCA GGGAATGTGC GATGCACGGC GGCGCATGCA CTTCGTCTCC
AACGTGGATG GGCATGAGCT GCAATCGGTG CTCGATGGGC TGCAGCCGCG CAGCACGCTG
TTCATCGTGG CCTCCAAGGT CTTCAACACG CAGGAGACGC TGACCAATGC GCGCAGTGCG
CTGCAATGGT TCCATGCGCA GGGCGGTGAA GATGTGGCGC GGCATTTCGT GGCGCTGACC
ACCAATGCCT CGGCGGCTGC GCAGATGGGC ATCACCACCA CTTTCGGTTT CTGGGACTGG
GTGGGCGGGC GCTATTCGCT GTGGTCGGCG ATCGGGCTGC CCGTGGCCCT CGCCGTGGGA
GCTGCGGCAT TCCGCGACCT GCTGGCCGGC GCGCATGCCA TGGACCACCA TTTCCGCACG
GCACCGCTGC AGGCCAACCT GCCCGTGCGC CTGGGCCTGC TCGATGTCTG GAACCGCAAT
CTGCTGGGCT TTGCCAGCCG CTGCATTGCG CCCTACCACG CAGGCCTGCG GCGCCTGCCG
GCCTATCTGC AGCAACTGGA GATGGAGAGC AATGGCAAGC GCGTGGACCG CCAGGGCCGG
CCGCTGGCAC TGGGCTCAGC CCCCGTGCTC TGGGGCGAGC CGGGTACGGA TGGGCAGCAT
GCCTTCTTCC AGATGCTGCA CCAGGGTACG GACATCGTGC CGCTGGAGAT CATCGCCGTG
CAGCGGCCGT CGCACGGCCT GCAGGGCCAC CATGAGCAAC TGCTGGCCAA CGCTCTGGCC
CAGGCCCAGG CCTTGATGCA GGGGCGTTCC TGCGATGATG GCCATCGCCA CTTCCCGGGC
AACCGGCCCA GTACCTTCGT ACTGCTGGAT GCGCTCACGC CGGCGGCGCT GGGTGCGCTG
ATTGCCTTGC AGGAGCACCG CGTGTTCGTG GCGGGCGCGC TGTGGGGCCT CAACAGCTTC
GACCAATGGG GGGTGGAACT GGGCAAGCTG CTGGCGCGCG ACCTGCAGCA GCGCCTGGCC
AGCGGCGATG TGGTGCAGCT CGATGCATCG ACCGCAGGAC TGCTGCAGCG CATGCGGGCC
TGA
 
Protein sequence
MLSVIPQPPR CDHATVWPAL HHHALALRKG FDLRHAFADD PGRFAHFSQE APHCFADLSK 
NLWDAPAEAL LLRLARECAV EQQRDAMFAG EHVNGSEGRA VLHALLRCPR GESPPGLAWA
LAQVHETLDA MLAYAERVRA DAGITDVVCM GIGGSGLGPQ MAVQALQGMC DARRRMHFVS
NVDGHELQSV LDGLQPRSTL FIVASKVFNT QETLTNARSA LQWFHAQGGE DVARHFVALT
TNASAAAQMG ITTTFGFWDW VGGRYSLWSA IGLPVALAVG AAAFRDLLAG AHAMDHHFRT
APLQANLPVR LGLLDVWNRN LLGFASRCIA PYHAGLRRLP AYLQQLEMES NGKRVDRQGR
PLALGSAPVL WGEPGTDGQH AFFQMLHQGT DIVPLEIIAV QRPSHGLQGH HEQLLANALA
QAQALMQGRS CDDGHRHFPG NRPSTFVLLD ALTPAALGAL IALQEHRVFV AGALWGLNSF
DQWGVELGKL LARDLQQRLA SGDVVQLDAS TAGLLQRMRA