| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5594 |
|---|
| Symbol | |
|---|
| ID | 5751214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6220858 |
|---|
| End bp | 6221676 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641300727 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001566608 |
|---|
| Protein GI | 160901026 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.598675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.72838 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA GTTCCTCCAC CCTGGTGCGC GCCGCTGCGG CATGGGCCGT GGCACTGCTG
CTGTTCTTTC CGCTGGCCTG GCTGTTCCTG ACGGCCTTCA AGACGGAACT GCAGGCCATT
GCCGTGCCGC CGCTGTTCGT GTTCGAGCCC ACGCTGGCCA ACTTCGGCGA AGTGCAGCAG
CGCAGCGACT ACCTGCTGTA TGCGCGCAAT TCGCTGATCA CCAGCCTGGC CTCGACCCTG
ATCGGCCTGG CCATCGCCGT GCCTGCTGCC TACTCCATGG CGTTCTTCCG CAGCCGCCAC
ACGCGCGACG TGCTCATGTG GATGCTCTCG ACCAAGATGA TGCCGGCCGT GGGGGCCCTG
CTGCCCATCT ATGTGCTGGC GCAAGGGGCG GGCTTGCTGG ATTCGCTCAC CGTGCTGGTC
ATCGTCTTCA CGCTGTCCAA TCTGCCCATC ATGGTCTGGA TGCTCTACAG CGCGCTCAAG
GACATCCCCA ACGAGATCCT GGAAGCGGCG CGCATGGATG GCGCAGGCCT GTGGGCCGAG
TTCCGCCATG TGGTGCTGCC GCTGGCGGTG GGCGGCATTG CCTCCACCGG GCTGCTGTGC
CTGGTGCTGA GCTGGAACGA GGCCTTCTGG TCGCTGAACC TGAGCAGCGC CCGGGCCGGC
ACGCTGGCCA CGCTGATCGC CTCGTATGCC AGCCCCGAAG GGCTGTTCTG GGCCAAGCTC
TCGGCCGCTT CGCTGATCGC CATCGCTCCC ATCGTGGTGT TTGGCTGGTT CAGCCAGAAG
CAACTGGTGC AGGGCATGAC CTTTGGCGCC GTCAAGTAG
|
|---|
| Protein sequence | MKTSSSTLVR AAAAWAVALL LFFPLAWLFL TAFKTELQAI AVPPLFVFEP TLANFGEVQQ
RSDYLLYARN SLITSLASTL IGLAIAVPAA YSMAFFRSRH TRDVLMWMLS TKMMPAVGAL
LPIYVLAQGA GLLDSLTVLV IVFTLSNLPI MVWMLYSALK DIPNEILEAA RMDGAGLWAE
FRHVVLPLAV GGIASTGLLC LVLSWNEAFW SLNLSSARAG TLATLIASYA SPEGLFWAKL
SAASLIAIAP IVVFGWFSQK QLVQGMTFGA VK
|
|---|
| |